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Wang, Z., Zang, C., Cui, K., Schones, D. E., Barski, A., Peng, W., & Zhao, K. (2009). Genome-wide Mapping of HATs and HDACs Reveals Distinct Functions in Active and Inactive Genes. Cell, 138(5), 1019–1031.

Authors 7
  1. Zhibin Wang (first)
  2. Chongzhi Zang (additional)
  3. Kairong Cui (additional)
  4. Dustin E. Schones (additional)
  5. Artem Barski (additional)
  6. Weiqun Peng (additional)
  7. Keji Zhao (additional)
References 54 Referenced 1,144
  1. 10.1016/j.cell.2007.05.009 / Cell / High-resolution profiling of histone methylations in the human genome by Barski (2007)
  2. 10.1038/nature05915 / Nature / The complex language of chromatin regulation during transcription by Berger (2007)
  3. 10.1016/S1097-2765(03)00231-4 / Mol. Cell / Nucleosomes unfold completely at a transcriptionally active promoter by Boeger (2003)
  4. 10.1038/sj.onc.1210614 / Oncogene / HDAC6, at the crossroads between cytoskeleton and cell signaling by acetylation and ubiquitination by Boyault (2007)
  5. 10.1016/j.cell.2007.12.014 / Cell / High-resolution mapping and characterization of open chromatin across the genome by Boyle (2008)
  6. 10.1016/j.cell.2005.10.023 / Cell / Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription by Carrozza (2005)
  7. 10.1128/MCB.18.9.5355 / Mol. Cell. Biol. / A human RNA polymerase II complex containing factors that modify chromatin structure by Cho (1998)
  8. 10.1074/jbc.M701574200 / J. Biol. Chem. / PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex by Cho (2007)
  9. 10.1016/j.stem.2008.11.011 / Cell Stem Cell / Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation by Cui (2009)
  10. 10.1042/bj20021321 / Biochem. J. / Histone deacetylases (HDACs): characterization of the classical HDAC family by de Ruijter (2003)
  11. 10.1038/20974 / Nature / Structure and ligand of a histone acetyltransferase bromodomain by Dhalluin (1999)
  12. 10.1016/j.cell.2005.04.031 / Cell / Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF by Dou (2005)
  13. 10.1128/MCB.24.5.1884-1896.2004 / Mol. Cell. Biol. / Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans by Doyon (2004)
  14. 10.1016/j.molcel.2006.11.020 / Mol. Cell / Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions by Govind (2007)
  15. 10.1016/S0092-8674(01)00279-3 / Cell / Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes by Hassan (2001)
  16. 10.1038/ng1966 / Nat. Genet. / Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome by Heintzman (2007)
  17. 10.1016/S0092-8674(00)00051-9 / Cell / Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis by Ikura (2000)
  18. 10.1016/j.molcel.2005.11.021 / Mol. Cell / Eaf3 chromodomain interaction with methylated H3-K36 links histone deacetylation to Pol II elongation by Joshi (2005)
  19. 10.1016/S0092-8674(00)80217-2 / Cell / Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters by Kadosh (1997)
  20. 10.1038/nrd2681 / Nat. Rev. Drug Discov. / Therapeutic application of histone deacetylase inhibitors for central nervous system disorders by Kazantsev (2008)
  21. 10.1016/j.cell.2005.10.025 / Cell / Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex by Keogh (2005)
  22. 10.1038/nature03877 / Nature / A high-resolution map of active promoters in the human genome by Kim (2005)
  23. 10.1016/j.cell.2008.04.036 / Cell / Genome-wide analysis reveals MOF as a key regulator of dosage compensation and gene expression in Drosophila by Kind (2008)
  24. 10.1038/ng907 / Nat. Genet. / Genome-wide binding map of the histone deacetylase Rpd3 in yeast by Kurdistani (2002)
  25. 10.1016/j.cell.2007.01.015 / Cell / The role of chromatin during transcription by Li (2007)
  26. 10.1128/MCB.26.8.3018-3028.2006 / Mol. Cell. Biol. / Methylation of histone H3 mediates the association of the NuA3 histone acetyltransferase with chromatin by Martin (2006)
  27. 10.1016/S0092-8674(00)80903-4 / Cell / FACT, a factor that facilitates transcript elongation through nucleosomes by Orphanides (1998)
  28. 10.1038/nature03242 / Nature / Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation by Pray-Grant (2005)
  29. 10.1038/sj.onc.1210607 / Oncogene / Males absent on the first (MOF): from flies to humans by Rea (2007)
  30. 10.1016/S1097-2765(03)00186-2 / Mol. Cell / Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter by Reinke (2003)
  31. 10.1016/j.molcel.2004.09.021 / Mol. Cell / Global position and recruitment of HATs and HDACs in the yeast genome by Robert (2004)
  32. 10.1101/gr.5767907 / Genome Res. / Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns by Roh (2007)
  33. 10.1146/annurev.biochem.70.1.81 / Annu. Rev. Biochem. / Histone acetyltransferases by Roth (2001)
  34. 10.1038/33952 / Nature / Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3 by Rundlett (1998)
  35. 10.1016/j.cell.2008.02.022 / Cell / Dynamic regulation of nucleosome positioning in the human genome by Schones (2008)
  36. 10.1146/annurev.biochem.76.052705.162114 / Annu. Rev. Biochem. / Functions of site-specific histone acetylation and deacetylation by Shahbazian (2007)
  37. 10.1126/science.272.5260.408 / Science / A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p by Taunton (1996)
  38. 10.1074/jbc.M500437200 / J. Biol. Chem. / Identification of direct genomic targets downstream of the nuclear factor-kappaB transcription factor mediating tumor necrosis factor signaling by Tian (2005)
  39. 10.1038/nature07730 / Nature / ChIP-seq accurately predicts tissue-specific activity of enhancers by Visel (2009)
  40. 10.1038/35044127 / Nature / Global histone acetylation and deacetylation in yeast by Vogelauer (2000)
  41. 10.1126/science.1077790 / Science / Requirement of Hos2 histone deacetylase for gene activity in yeast by Wang (2002)
  42. 10.1016/S1097-2765(01)00405-1 / Mol. Cell / Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase by Wang (2001)
  43. 10.1038/ng.154 / Nat. Genet. / Combinatorial patterns of histone acetylations and methylations in the human genome by Wang (2008)
  44. 10.1016/j.gde.2009.02.001 / Curr. Opin. Genet. Dev. / Characterization of human epigenomes by Wang (2009)
  45. 10.1016/j.immuni.2008.12.009 / Immunity / Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+ T cells by Wei (2009)
  46. 10.1016/j.cell.2005.03.036 / Cell / WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development by Wysocka (2005)
  47. 10.1038/nature04815 / Nature / A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling by Wysocka (2006)
  48. 10.1093/emboj/18.22.6448 / EMBO J. / Sum1 and Hst1 repress middle sporulation-specific gene expression during mitosis in Saccharomyces cerevisiae by Xie (1999)
  49. 10.1016/S0959-437X(99)80021-5 / Curr. Opin. Genet. Dev. / Coactivator and corepressor complexes in nuclear receptor function by Xu (1999)
  50. 10.1002/bies.20104 / Bioessays / Lysine acetylation and the bromodomain: a new partnership for signaling by Yang (2004)
  51. 10.1093/nar/gkh252 / Nucleic Acids Res. / The diverse superfamily of lysine acetyltransferases and their roles in leukemia and other diseases by Yang (2004)
  52. 10.1128/MCB.25.8.2873-2884.2005 / Mol. Cell. Biol. / Class II histone deacetylases: from sequence to function, regulation, and clinical implication by Yang (2005)
  53. 10.1038/nrm2346 / Nat. Rev. Mol. Cell Biol. / The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men by Yang (2008)
  54. 10.1093/bioinformatics/btp340 / Bioinformatics / A clustering approach for identification of enriched domains from histone modification ChIP-Seq data by Zang (2009)
Dates
Type When
Created 16 years ago (Aug. 27, 2009, 6:30 a.m.)
Deposited 2 years, 7 months ago (Jan. 28, 2023, 11:31 a.m.)
Indexed 6 hours, 43 minutes ago (Sept. 1, 2025, 6:33 a.m.)
Issued 16 years ago (Sept. 1, 2009)
Published 16 years ago (Sept. 1, 2009)
Published Print 16 years ago (Sept. 1, 2009)
Funders 0

None

@article{Wang_2009, title={Genome-wide Mapping of HATs and HDACs Reveals Distinct Functions in Active and Inactive Genes}, volume={138}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/j.cell.2009.06.049}, DOI={10.1016/j.cell.2009.06.049}, number={5}, journal={Cell}, publisher={Elsevier BV}, author={Wang, Zhibin and Zang, Chongzhi and Cui, Kairong and Schones, Dustin E. and Barski, Artem and Peng, Weiqun and Zhao, Keji}, year={2009}, month=sep, pages={1019–1031} }