Crossref journal-article
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Cell (78)
Bibliography

Guenther, M. G., Levine, S. S., Boyer, L. A., Jaenisch, R., & Young, R. A. (2007). A Chromatin Landmark and Transcription Initiation at Most Promoters in Human Cells. Cell, 130(1), 77–88.

Authors 5
  1. Matthew G. Guenther (first)
  2. Stuart S. Levine (additional)
  3. Laurie A. Boyer (additional)
  4. Rudolf Jaenisch (additional)
  5. Richard A. Young (additional)
References 61 Referenced 1,610
  1. 10.1093/hmg/ddh068 / Hum. Mol. Genet. / Unique gene expression signatures of independently-derived human embryonic stem cell lines by Abeyta (2004)
  2. 10.1016/S0092-8674(02)01077-2 / Cell / Deciphering the transcriptional histone acetylation code for a human gene by Agalioti (2002)
  3. 10.1038/ncb1403 / Nat. Cell Biol. / Chromatin signatures of pluripotent cell lines by Azuara (2006)
  4. 10.1074/jbc.M500796200 / J. Biol. Chem. / Spatial distribution of di- and tri-methyl lysine 36 of histone H3 at active genes by Bannister (2005)
  5. 10.1073/pnas.082249499 / Proc. Natl. Acad. Sci. USA / Methylation of histone H3 Lys 4 in coding regions of active genes by Bernstein (2002)
  6. 10.1016/j.cell.2005.01.001 / Cell / Genomic maps and comparative analysis of histone modifications in human and mouse by Bernstein (2005)
  7. 10.1016/j.cell.2006.02.041 / Cell / A bivalent chromatin structure marks key developmental genes in embryonic stem cells by Bernstein (2006)
  8. 10.1016/j.cell.2005.08.020 / Cell / Core transcriptional regulatory circuitry in human embryonic stem cells by Boyer (2005)
  9. 10.1186/1471-213X-4-10 / BMC Dev. Biol. / MPSS profiling of human embryonic stem cells by Brandenberger (2004)
  10. 10.1038/nbt971 / Nat. Biotechnol. / Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation by Brandenberger (2004)
  11. 10.1038/sj.embor.7400686 / EMBO Rep. / Histone modification patterns associated with the human X chromosome by Brinkman (2006)
  12. 10.1016/j.cell.2006.04.025 / Cell / Tethering RITS toa nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing by Buhler (2006)
  13. 10.1126/science.1108625 / Science / Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution by Cheng (2005)
  14. 10.1016/S0968-0004(00)01615-7 / Trends Biochem. Sci. / Control of elongation by Pol II by Conaway (2000)
  15. 10.1016/S0167-4781(02)00453-0 / Biochim. Biophys. Acta / Promoter escape by Pol II by Dvir (2002)
  16. 10.1126/science.1121158 / Science / The widespread impact of mammalian MicroRNAs on mRNA repression and evolution by Farh (2005)
  17. 10.1016/S1097-2765(04)00081-4 / Mol. Cell / Menin associates with a trithorax family histone methyltransferase complex and with the hoxc8 locus by Hughes (2004)
  18. 10.1126/science.1063127 / Science / Translating the histone code by Jenuwein (2001)
  19. 10.1126/science.1114955 / Science / Pol II is required for RNAi-dependent heterochromatin assembly by Kato (2005)
  20. 10.1038/nature03877 / Nature / A high-resolution map of active promoters in the human genome by Kim (2005)
  21. 10.1016/S1097-2765(03)00091-1 / Mol. Cell / The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation by Krogan (2003)
  22. 10.1128/MCB.23.12.4207-4218.2003 / Mol. Cell. Biol. / Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by Pol II by Krogan (2003)
  23. 10.1002/bies.950151005 / Bioessays / Common mechanisms for the control of eukaryotic transcriptional elongation by Krumm (1993)
  24. 10.1038/21239 / Nature / Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme by Kuras (1999)
  25. 10.1016/j.cub.2005.07.028 / Curr. Biol. / BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex by Laribee (2005)
  26. 10.1006/jmbi.1993.1427 / J. Mol. Biol. / HIV-1 Tat overcomes inefficient transcriptional elongation in vitro by Laspia (1993)
  27. 10.1093/nar/26.4.919 / Nucleic Acids Res. / Direct cloning of DNA that interacts in vivo with a specific protein: application to Pol II and sites of pausing in Drosophila by Law (1998)
  28. 10.1016/j.cell.2006.02.043 / Cell / Control of developmental regulators by Polycomb in human embryonic stem cells by Lee (2006)
  29. 10.1074/jbc.M212134200 / J. Biol. Chem. / The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of Pol II by Li (2003)
  30. 10.1074/jbc.M209294200 / J. Biol. Chem. / Association of the histone methyltransferase Set2 with Pol II plays a role in transcription elongation by Li (2002)
  31. 10.1073/pnas.0401866101 / Proc. Natl. Acad. Sci. USA / Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome by Liang (2004)
  32. 10.1101/sqb.1998.63.347 / Cold Spring Harb. Symp. Quant. Biol. / Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation by Lis (1998)
  33. 10.1016/j.cell.2006.06.035 / Cell / Interchromosomal interactions and olfactory receptor choice by Lomvardas (2006)
  34. 10.1016/j.ceb.2004.09.007 / Curr. Opin. Cell Biol. / The clinical potential of stem cells by Mayhall (2004)
  35. 10.1038/nrm1938 / Nat. Rev. Mol. Cell Biol. / Chromatin in pluripotent embryonic stem cells and differentiation by Meshorer (2006)
  36. 10.1016/j.devcel.2005.10.017 / Dev. Cell / Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells by Meshorer (2006)
  37. 10.1073/pnas.231473398 / Proc. Natl. Acad. Sci. USA / COMPASS: a complex of proteins associated with a trithorax-related SET domain protein by Miller (2001)
  38. 10.1016/j.molcel.2005.05.009 / Mol. Cell / Dynamic lysine methylation on histone H3 defines the regulatory phase of gene transcription by Morillon (2005)
  39. 10.1016/S1097-2765(03)00092-3 / Mol. Cell / Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity by Ng (2003)
  40. 10.1093/emboj/18.13.3688 / EMBO J. / A novel Pol II-containing complex potentiates Tat-enhanced HIV-1 transcription by Parada (1999)
  41. 10.1242/dev.01451 / Development / Human embryonic stem cells: prospects for development by Pera (2004)
  42. 10.1016/j.cell.2005.06.026 / Cell / Genome-wide map of nucleosome acetylation and methylation in yeast by Pokholok (2005)
  43. {'key': '10.1016/j.cell.2007.05.042_bib43', 'series-title': 'A Genetic Switch', 'author': 'Ptashne', 'year': '1986'} / A Genetic Switch by Ptashne (1986)
  44. 10.1016/j.molcel.2005.03.010 / Mol. Cell / Genome-wide analyses reveal Pol II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit by Radonjic (2005)
  45. 10.1073/pnas.0607617103 / Proc. Natl. Acad. Sci. USA / The genomic landscape of histone modifications in human T cells by Roh (2006)
  46. 10.1038/nature01080 / Nature / Active genes are tri-methylated at K4 of histone H3 by Santos-Rosa (2002)
  47. 10.1016/S0012-1606(03)00256-2 / Dev. Biol. / Molecular signature of human embryonic stem cells and its comparison with the mouse by Sato (2003)
  48. 10.1038/nrm1981 / Nat. Rev. Mol. Cell Biol. / Breaking barriers to transcription elongation by Saunders (2006)
  49. 10.1038/ncb1076 / Nat. Cell Biol. / Histone H3 lysine 4 methylation patterns in higher eukaryotic genes by Schneider (2004)
  50. 10.1101/gad.1198204 / Genes Dev. / The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote by Schubeler (2004)
  51. 10.1101/gad.1235904 / Genes Dev. / Elongation by Pol II: the short and long of it by Sims (2004)
  52. 10.1126/science.1068356 / Science / Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation by Soutoglou (2002)
  53. 10.1128/MMBR.64.2.435-459.2000 / Microbiol. Mol. Biol. Rev. / Acetylation of histones and transcription-related factors by Sterner (2000)
  54. 10.1038/47412 / Nature / The language of covalent histone modifications by Strahl (2000)
  55. 10.1128/MCB.22.5.1298-1306.2002 / Mol. Cell. Biol. / Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression by Strahl (2002)
  56. 10.1073/pnas.0400782101 / Proc. Natl. Acad. Sci. USA / A gene atlas of the mouse and human protein-encoding transcriptomes by Su (2004)
  57. 10.1002/jcb.20421 / J. Cell. Biochem. / A COMPASS in the voyage of defining the role of trithorax/MLL-containing complexes: linking leukemogensis to covalent modifications of chromatin by Tenney (2005)
  58. 10.1016/S0092-8674(02)01080-2 / Cell / Cellular memory and the histone code by Turner (2002)
  59. 10.1634/stemcells.2004-0162 / Stem Cells / Transcriptome profiling of human and murine ESCs identifies divergent paths required to maintain the stem cell state by Wei (2005)
  60. 10.1016/S0092-8674(00)80939-3 / Cell / A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA by Wei (1998)
  61. 10.1101/gad.1055503 / Genes Dev. / Phosphorylation of Pol II CTD regulates H3 methylation in yeast by Xiao (2003)
Dates
Type When
Created 18 years, 1 month ago (July 13, 2007, 7:17 a.m.)
Deposited 2 years, 6 months ago (Jan. 28, 2023, 9:50 a.m.)
Indexed 19 hours, 2 minutes ago (Aug. 22, 2025, 12:47 a.m.)
Issued 18 years, 1 month ago (July 1, 2007)
Published 18 years, 1 month ago (July 1, 2007)
Published Print 18 years, 1 month ago (July 1, 2007)
Funders 0

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@article{Guenther_2007, title={A Chromatin Landmark and Transcription Initiation at Most Promoters in Human Cells}, volume={130}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/j.cell.2007.05.042}, DOI={10.1016/j.cell.2007.05.042}, number={1}, journal={Cell}, publisher={Elsevier BV}, author={Guenther, Matthew G. and Levine, Stuart S. and Boyer, Laurie A. and Jaenisch, Rudolf and Young, Richard A.}, year={2007}, month=jul, pages={77–88} }