Crossref journal-article
Elsevier BV
Cell (78)
Bibliography

Shi, Y., Lan, F., Matson, C., Mulligan, P., Whetstine, J. R., Cole, P. A., Casero, R. A., & Shi, Y. (2004). Histone Demethylation Mediated by the Nuclear Amine Oxidase Homolog LSD1. Cell, 119(7), 941–953.

Authors 8
  1. Yujiang Shi (first)
  2. Fei Lan (additional)
  3. Caitlin Matson (additional)
  4. Peter Mulligan (additional)
  5. Johnathan R. Whetstine (additional)
  6. Philip A. Cole (additional)
  7. Robert A. Casero (additional)
  8. Yang Shi (additional)
References 65 Referenced 3,537
  1. 10.1016/S1097-2765(02)00542-7 / Mol. Cell / The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly by Ahmad (2002)
  2. 10.1016/0092-8674(80)90234-2 / Cell / Proteolytic processing of histone H3 in chromatin by Allis (1980)
  3. Aravind, L., and Iyer, L.M. (2002). The SWIRM domain: a conserved module found in chromosomal proteins points to novel chromatin-modifying activities. Genome Biol 3, RESEARCH0039. Published online July 24, 2002. doi:10.1186/gb-2002-3-8-research0039. (10.1186/gb-2002-3-8-research0039)
  4. 10.1038/sj.onc.1204639 / Oncogene / Molecular mechanisms of leukemogenesis mediated by MLL fusion proteins by Ayton (2001)
  5. 10.1016/S0896-6273(01)00371-3 / Neuron / Regulation of neuronal traits by a novel transcriptional complex by Ballas (2001)
  6. 10.1038/35065138 / Nature / Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain by Bannister (2001)
  7. 10.1016/S0092-8674(02)00798-5 / Cell / Histone modificaiton by Bannister (2002)
  8. 10.1093/embo-reports/kvf013 / EMBO Rep / Methylation at arginine 17 of histone H3 is linked to gene activation by Bauer (2002)
  9. 10.1074/jbc.R200005200 / J. Biol. Chem / Structure-function relationships in flavoenzyme-dependent amine oxidations by Binda (2002)
  10. 10.1021/bi049592e / Biochemistry / Substrate specificity and kinetic mechanism of the Sir2 family of NAD+-dependent histone/protein deacetylases by Borra (2004)
  11. 10.1101/gad.940201 / Genes Dev / Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae by Briggs (2001)
  12. 10.1126/science.1076997 / Science / Rloe of histone H3 lysine 27 methylation in Polycomb-group silencing by Cao (2002)
  13. 10.1126/science.284.5423.2174 / Science / Regulation of transcription by a protein methyltransferase by Chen (1999)
  14. 10.1016/S0968-0004(02)02058-3 / Trends Biochem. Sci / A second catalytic domain in the Elp3 histone acetyltransferases by Chinenov (2002)
  15. 10.1016/j.cell.2004.08.020 / Cell / Histone deimination antagonizes arginine methylation by Cuthbert (2004)
  16. 10.1016/S0092-8674(02)00975-3 / Cell / Drosophila Enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites by Czermin (2002)
  17. 10.1093/emboj/cdf561 / EMBO J / Loss of spr-5 bypasses the requirement for the C.elegans presenilin sel-12 by derepressing hop-1 by Eimer (2003)
  18. 10.1016/S0960-9822(02)00924-7 / Curr. Biol / Purification and functional characterization of SET8, a nucleosomal histone H4-lysine 20-specific methyltransferase by Fang (2002)
  19. 10.1016/S0960-9822(02)00901-6 / Curr. Biol / Methylation of H3-lysine 79 is mediated by a new family of HMTases without a SET domain by Feng (2002)
  20. 10.1073/pnas.112008599 / Proc. Natl. Acad. Sci. USA / A core-BRAF35 complex containing histone deacetylase mediates repression of neuronal-specific genes by Hakimi (2002)
  21. 10.1074/jbc.M208992200 / J. Biol. Chem / A candidate X-linked mental retardation gene is a component of a new family of histone deacetylase-containing complexes by Hakimi (2003)
  22. 10.1038/ncb1151 / Nat. Cell Biol / SMYD3 encodes a histone methyltransferase involved in the proliferation of cancer cells by Hamamoto (2004)
  23. 10.1126/science.1091109 / Science / Regulation of flowering time by histone acetylation in Arabidopsis by He (2003)
  24. 10.1074/jbc.M007372200 / J. Biol. Chem / Stable histone deacetylase complexes distinguished by the presence of SANT domain proteins CoREST/Kiaa0071 and Mta-L1 by Humphrey (2001)
  25. 10.1101/gad.1022402 / Genes Dev / Suppressors of the egg-laying defective phenotype of sel-12 presenilin mutants implicate the CoREST corepressor complex in LIN-12/Notch signaling in C. elegans by Jarriault (2002)
  26. 10.1126/science.1063127 / Science / Translating the histone code by Jenuwein (2001)
  27. 10.1038/ni1099 / Nat. Immunol / B cell-specific loss of histone 3 lysine 9 methylation in the V(H) locus depends on Pax5 by Johnson (2004)
  28. 10.1073/pnas.2635658100 / Proc. Natl. Acad. Sci. USA / p57(Kip2) cooperates with Nurr1 in developing dopamine cells by Joseph (2003)
  29. 10.1016/S0021-9258(18)91206-8 / J. Biol. Chem / Epsilon-alkyllysinase. Purification and properties of the enzyme by Kim (1964)
  30. 10.1093/emboj/19.6.1176 / EMBO J / Acetylation by Kouzarides (2000)
  31. 10.1016/S1097-2765(03)00091-1 / Mol. Cell / The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p by Krogan (2003)
  32. 10.1101/gad.1035902 / Genes Dev / Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein by Kuzmichev (2002)
  33. 10.1038/35065132 / Nature / Methylatin of histone H3 lysine 9 creates a binding site for HP1 proteins by Lachner (2001)
  34. 10.1016/S0006-291X(03)00416-9 / Biochem. Biophys. Res. Commun / Yeast Fms1 is a FAD-utilizing polyamine oxidase by Landry (2003)
  35. 10.1101/gad.9.6.639 / Genes Dev / Cloning of p57KIP2, a cyclin-dependent kinase inhibitor with unique domain structure and tissue distribution by Lee (1995)
  36. 10.1073/pnas.0401866101 / Proc. Natl. Acad. Sci. USA / Distinct localization of histone H3 acetylation and H3–K4 methylation to the transcription start sites in the human genome by Liang (2004)
  37. 10.1126/science.1064413 / Science / Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus by Litt (2001)
  38. 10.1006/abio.2000.4782 / Anal. Biochem / A spectrophotometric method for determining the oxidative deamination of methylamine by the amine oxidases by Lizcano (2000)
  39. 10.1126/science.1076469 / Science / Corepressor-dependent silencing of chromosomal regions encoding neuronal genes by Lunyak (2002)
  40. 10.1016/S0092-8674(02)00976-5 / Cell / Histone methyltransferase activity of a Drosophila polycomb group repressor complex by Muller (2002)
  41. 10.1126/science.1060118 / Science / Role of histone H3 lysine 9 methylatin in epigenetic control of heterochromatin assembly by Nakayama (2001)
  42. 10.1073/pnas.0437846100 / Proc. Natl. Acad. Sci. USA / Lysine-79 of histone H3 is hypomethylated at silenced loci in yeast and mammalian cells by Ng (2003)
  43. 10.1016/S1097-2765(03)00092-3 / Mol. Cell / Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity by Ng (2003)
  44. 10.1038/35087620 / Nature / Rb targets histone H3 methylation and HP1 to promoters by Nielsen (2001)
  45. 10.1016/S1097-2765(02)00548-8 / Mol. Cell / RP-Set7 is a nucleosome-specific methyltransferase that modifies lysine 20 of histone H4 and is associated with silent chromatin by Nishioka (2002)
  46. 10.1126/science.1064150 / Science / Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries by Noma (2001)
  47. 10.1016/0006-291X(73)91383-1 / Biochem. Biophys. Res. Commun / Enzymatic demethylation of calf thymus histones by Paik (1973)
  48. 10.1016/0003-9861(74)90175-1 / Arch. Biochem. Biophys / Epsilon-alkyllysinase. New assay method, purification, and biological significance by Paik (1974)
  49. 10.1038/ng789 / Nat. Genet / Histone H3 lysine 9 methylation is an epigenetic imprint of facultative heterochromatin by Peters (2002)
  50. 10.1038/35020506 / Nature / Regulation of chromatin structure by site-specific histone H3 methyltransferases by Rea (2000)
  51. 10.1016/S0955-0674(00)00208-8 / Curr. Opin. Cell Biol / Histone methylation versus histone acetylation by Rice (2001)
  52. 10.1146/annurev.biochem.70.1.81 / Annu. Rev. Biochem / Histone acetyltransferases by Roth (2001)
  53. 10.1002/1099-0801(200005)14:3<173::AID-BMC957>3.0.CO;2-O / Biomed. Chromatogr / HPLC-OPLC-MS investigation of change of formaldehyde and its generators in human teeth of different physiological stage by Rozylo (2000)
  54. 10.1038/nature01080 / Nature / Active genes are tri-methylated at K4 of histone H3 by Santos-Rosa (2002)
  55. 10.1093/nar/gkg372 / Nucleic Acids Res / The histone 3 lysine 36 methyltransferase, SET2, is involved in transcriptional elongation by Schaft (2003)
  56. 10.1038/ncb1076 / Nat. Cell Biol / Histone H3 lysine 4 methylation patterns in higher eukaryotic genes by Schneider (2004)
  57. 10.1021/bi002631b / Biochemistry / Methylation of histone H3 by coactivator-associated arginine methyltransferase 1 by Schurter (2001)
  58. 10.1016/j.tig.2004.07.004 / Trends Genet / Metabolic enzymes and coenzymes in transcription–a direct link between metabolism and transcription? by Shi (2004)
  59. 10.1038/nature01550 / Nature / Coordinated histone modifications mediated by a CtBP co-repressor complex by Shi (2003)
  60. 10.1016/S0960-9822(01)00294-9 / Curr. Biol / Methylatin of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1 by Strahl (2001)
  61. 10.1073/pnas.082117599 / Proc. Natl. Acad. Sci. USA / A DNA vector-based RNAi technology to suppress gene expression in mammalian cells by Sui (2002)
  62. 10.1038/27699 / Nature / Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex by Tong (1998)
  63. 10.1126/science.1101400 / Science / Human PAD4 regulates histone arginine methylation levels via demethylimination by Wang (2004)
  64. 10.1073/pnas.98.4.1454 / Proc. Natl. Acad. Sci. USA / CoREST is an integral component of the CoREST-human histone deacetylase complex by You (2001)
  65. 10.1101/gad.927301 / Genes Dev / Transcriptin regulation by histone methylation by Zhang (2001)
Dates
Type When
Created 20 years, 7 months ago (Dec. 29, 2004, 7:16 p.m.)
Deposited 2 years, 6 months ago (Jan. 28, 2023, 6:37 a.m.)
Indexed 3 hours, 28 minutes ago (Aug. 21, 2025, 2:17 p.m.)
Issued 20 years, 8 months ago (Dec. 1, 2004)
Published 20 years, 8 months ago (Dec. 1, 2004)
Published Print 20 years, 8 months ago (Dec. 1, 2004)
Funders 0

None

@article{Shi_2004, title={Histone Demethylation Mediated by the Nuclear Amine Oxidase Homolog LSD1}, volume={119}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/j.cell.2004.12.012}, DOI={10.1016/j.cell.2004.12.012}, number={7}, journal={Cell}, publisher={Elsevier BV}, author={Shi, Yujiang and Lan, Fei and Matson, Caitlin and Mulligan, Peter and Whetstine, Johnathan R. and Cole, Philip A. and Casero, Robert A. and Shi, Yang}, year={2004}, month=dec, pages={941–953} }