DOI: 10.1016/j.bbapap.2007.07.010. Analysis of the structural consensus of the zinc coordination centers of metalloprotein structures

Analysis of the structural consensus of the zinc coordination centers of metalloprotein structures

10.1016/j.bbapap.2007.07.010

Crossref journal-article

Elsevier BV

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics (78)

Bibliography

Patel, K., Kumar, A., & Durani, S. (2007). Analysis of the structural consensus of the zinc coordination centers of metalloprotein structures. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 1774(10), 1247â1253.

Authors 3

Kirti Patel (first)
Anil Kumar (additional)
Susheel Durani (additional)

References 27 Referenced 101

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{'key': '10.1016/j.bbapap.2007.07.010_bib2', 'first-page': '403', 'article-title': 'Structural zinc sites', 'volume': 'vol. 3', 'author': 'Auld', 'year': '2004'} / Structural zinc sites by Auld (2004)
10.1146/annurev.bi.61.070192.004341 / Ann. Rev. Biochem. / Zinc proteins: enzymes, storage proteins, transcription factors, and replication proteins by Coleman (1992)
10.1021/bi9624604 / Biochemistry / Flexibility of liver alcohol dehydrogenase in stereoselective binding of 3-butylthiolane 1-oxides by Cho (1997)
10.1016/0959-440X(93)90156-F / Curr. Opin. Struck. Biol. / Carbonic anhydrase and the role of orientation in catalysis by Lindskog (1993)
10.1038/338594a0 / Nature / Phenol stabilizes more helix in a new symmetrical zinc insulin hexamer by Derewenda (1989)
10.1021/bi034324m / Biochemistry / Solution structure of Apo Cu,Zn superoxide dismutase: role of metal ions in protein folding by Banci (2003)
10.1016/S0021-9258(17)43831-2 / J. Biol. Chem. / Xenopus transcription factor A requires zinc for binding to the 5 S RNA gene by Hanas (1983)
10.1021/pr050361j / J. Proteome Res. / Counting the zinc–proteins encoded in the human genome by Andreini (2006)
10.1021/pr0603699 / J. Proteome Res. / Zinc through the three domains of life by Andreini (2006)
10.1023/A:1012976615056 / BioMetals / Zinc coordination sphere in biochemical zinc sites by Auld (2001)
10.1016/S0968-0004(00)89044-1 / Trends Biochem. Sci. / Protein design: novel metal-binding sites by Regan (1995)
10.1016/S0065-3233(08)60538-0 / Adv. Protein Chem. / Structural biology of zinc by Christianson (1991)
10.1073/pnas.94.26.14231 / Proc. Natl. Acad. Sci. U. S. A. / Classification of mononuclear zinc metal sites in protein structures by Karlin (1997)
10.1038/346225b0 / Nature / Another catalytic triad? by Christianson (1990)
10.1093/protein/4.1.57 / Protein Eng. / Geometry of interaction of metal ions with histidine residues in protein structures by Chakrabarti (1990)
10.1021/ja00168a021 / J. Am. Chem. Soc. / A new force field for modeling metalloproteins by Vedani (1990)
10.1021/ar00034a005 / Acc. Chem. Res. / Zinc: biological functions and coordination motifs by Vallee (1993)
10.1002/pro.5560070805 / Protein Sci. / Analysis of zinc binding sites in protein crystal structures by Alberts (1998)
10.1107/S0907444900005849 / Acta Crystallogr., D Biol. Crystallogr. / The geometry of metal–ligand interactions relevant to proteins. II. Angles at the metal atom, additional weak metal–donor interactions by Harding (2000)
10.1107/S0907444906014594 / Acta Crystallogr., D Biol. Crystallogr. / Small revisions to predicted distances around metal sites in proteins by Harding (2006)
10.1021/ja00198a065 / J. Am. Chem. Soc. / Carboxylate–histidine–zinc interactions in protein structure and function by Christianson (1989)
10.1093/nar/28.1.235 / Nucleic Acids Res. / The Protein Data Bank by Berman (2000)
10.1093/bioinformatics/btg224 / Bioinformatics / PISCES: a protein sequence culling server by Wang (2003)
10.1016/0014-5793(89)81805-8 / FEBS Lett. / Short and long spacer sequences and other structural features of zinc binding sites in zinc enzymes by Vallee (1989)
10.1073/pnas.88.3.999 / Proc. Natl. Acad. Sci. U. S. A. / Zinc fingers, zinc clusters, and zinc twists in DNA-binding protein domains by Vallee (1991)
10.1021/bi00476a001 / Biochemistry / Zinc coordination, function, and structure of zinc enzymes and other proteins by Vallee (1990)

Dates

Type	When
Created	18 years ago (Aug. 9, 2007, 8:21 a.m.)
Deposited	4 years ago (Aug. 21, 2021, 9:35 a.m.)
Indexed	1 month, 1 week ago (July 25, 2025, 6:46 a.m.)
Issued	17 years, 11 months ago (Oct. 1, 2007)
Published	17 years, 11 months ago (Oct. 1, 2007)
Published Print	17 years, 11 months ago (Oct. 1, 2007)

Funders 0

None

BibTeX

@article{Patel_2007, title={Analysis of the structural consensus of the zinc coordination centers of metalloprotein structures}, volume={1774}, ISSN={1570-9639}, url={http://dx.doi.org/10.1016/j.bbapap.2007.07.010}, DOI={10.1016/j.bbapap.2007.07.010}, number={10}, journal={Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics}, publisher={Elsevier BV}, author={Patel, Kirti and Kumar, Anil and Durani, Susheel}, year={2007}, month=oct, pages={1247–1253} }

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