10.1016/s0959-440x(02)00298-1
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Elsevier BV
Current Opinion in Structural Biology (78)
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Caruthers, J. M., & McKay, D. B. (2002). Helicase structure and mechanism. Current Opinion in Structural Biology, 12(1), 123–133.

Authors 2
  1. Jonathan M Caruthers (first)
  2. David B McKay (additional)
References 42 Referenced 450
  1. 10.1016/S0959-440X(05)80116-2 / Curr Opin Struct Biol / Helicases: amino acid sequence comparisons and structure-function relationships by Gorbalenya (1993)
  2. 10.1002/j.1460-2075.1982.tb01276.x / EMBO J / Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold by Walker (1982)
  3. 10.1016/S0092-8674(00)80925-3 / Cell / Mechanical devices of the spliceosome: motors, clocks, springs, and things by Staley (1998)
  4. 10.1074/jbc.M100157200 / J Biol Chem / Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F by Rogers (2001)
  5. 10.1101/gr.9.1.27 / Genome Res / AAA+: a class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes by Neuwald (1999)
  6. 10.1038/384379a0 / Nature / Crystal structure of a DExx box DNA helicase by Subramanya (1996)
  7. 10.1038/355374a0 / Nature / Structure of the recA protein-ADP complex by Story (1992)
  8. 10.1016/S0092-8674(00)80525-5 / Cell / Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP by Korolev (1997)
  9. 10.1038/nsb0697-463 / Nat Struct Biol / Structure of the hepatitis C virus RNA helicase domain by Yao (1997)
  10. 10.1002/pro.5560070309 / Protein Sci / Comparisons between the structures of HCV and Rep helicases reveal structural similarities between SF1 and SF2 super-families of helicases by Korolev (1998)
  11. 10.1073/pnas.96.21.11717 / Proc Natl Acad Sci USA / Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus by Machius (1999)
  12. 10.1093/oxfordjournals.jbchem.a022566 / J Biochem / Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair by Nakagawa (1999)
  13. 10.1093/emboj/18.24.6899 / EMBO J / Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair by Theis (1999)
  14. 10.1016/S1097-2765(01)00329-X / Mol Cell / DExD/H box RNA helicases: from generic motors to specific dissociation functions by Tanner (2001)
  15. 10.1016/S0969-2126(99)80088-4 / Structure / Crystal structure of the ATPase domain of translation initiation factor 4A from Saccharomyces cerevisiae — the prototype of the DEAD box protein family by Benz (1999)
  16. 10.1017/S1355838299991410 / RNA / Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase by Johnson (1999)
  17. 10.1073/pnas.97.24.13080 / Proc Natl Acad Sci USA / Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase by Caruthers (2000)
  18. 10.1073/pnas.98.4.1465 / Proc Natl Acad Sci USA / Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii by Story (2001)
  19. 10.1073/pnas.92.9.3869 / Proc Natl Acad Sci USA / Bacteriophage T7 helicase/primase proteins form rings around single-stranded DNA that suggest a general structure for hexameric helicases by Egelman (1995)
  20. 10.1016/S0092-8674(00)81648-7 / Cell / Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7 by Sawaya (1999)
  21. 10.1016/S0092-8674(00)80871-5 / Cell / Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides by Singleton (2000)
  22. 10.1006/jmbi.2000.4398 / J Mol Biol / Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010 by Niedenzu (2001)
  23. 10.1006/jsbi.2000.4290 / J Struct Biol / Two different oligomeric states of the RuvB branch migration motor protein as revealed by electron microscopy by Miyata (2000)
  24. 10.1006/jmbi.2001.4852 / J Mol Biol / Structure and mechanism of the RuvB Holliday junction branch migration motor by Putnam (2001)
  25. 10.1073/pnas.031470598 / Proc Natl Acad Sci USA / Crystal structure of the Holliday junction migration motor protein RuvB from Thermus thermophilus HB8 by Yamada (2001)
  26. 10.1016/S0092-8674(00)80716-3 / Cell / Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism by Velankar (1999)
  27. 10.1038/355318a0 / Nature / The structure of the E. coli RecA protein monomer and polymer by Story (1992)
  28. 10.1093/nar/28.1.263 / Nucleic Acids Res / The Pfam Protein Families Database by Bateman (2000)
  29. 10.1006/jmbi.1999.2873 / J Mol Biol / DNA binding mediates conformational changes and metal ion coordination in the active site of PcrA helicase by Soultanas (1999)
  30. 10.1074/jbc.273.24.15045 / J Biol Chem / Crystal structure of RNA helicase from genotype 1b hepatitis C virus. A feasible mechanism of unwinding duplex RNA by Cho (1998)
  31. 10.1016/S0969-2126(98)00010-0 / Structure / Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding by Kim (1998)
  32. 10.1016/S0969-2126(00)80025-8 / Structure Fold Des / Molecular views of viral polyprotein processing revealed by the crystal structure of the hepatitis C virus bifunctional protease-helicase by Yao (1999)
  33. 10.1002/j.1460-2075.1992.tb05330.x / EMBO J / Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A by Pause (1992)
  34. 10.1093/nar/27.16.3310 / Nucleic Acids Res / Site-directed mutagenesis of motif III in PcrA helicase reveals a role in coupling ATP hydrolysis to strand separation by Dillingham (1999)
  35. 10.1073/pnas.131009598 / Proc Natl Acad Sci USA / Defining the roles of individual residues in the single-stranded DNA binding site of PcrA helicase by Dillingham (2001)
  36. 10.1128/MCB.13.11.6789 / Mol Cell Biol / The HRIGRXXR region of the DEAD box RNA helicase eukaryotic translation initiation factor 4A is required for RNA binding and ATP hydrolysis by Pause (1993)
  37. 10.1093/nar/26.11.2686 / Nucleic Acids Res / Characterisation of Bacillus stearothermophilus PcrA helicase: evidence against an active rolling mechanism by Bird (1998)
  38. 10.1093/emboj/19.14.3799 / EMBO J / Uncoupling DNA translocation and helicase activity in PcrA: direct evidence for an active mechanism by Soultanas (2000)
  39. 10.1021/bi992105o / Biochemistry / Demonstration of unidirectional single-stranded DNA translocation by PcrA helicase: measurement of step size and translocation speed by Dillingham (2000)
  40. 10.1006/jmbi.1999.2666 / J Mol Biol / A two-site kinetic mechanism for ATP binding and hydrolysis by E. coli Rep helicase dimer bound to a single-stranded oligodeoxynucleotide by Hsieh (1999)
  41. 10.1107/S0021889891004399 / J Appl Crystallogr / MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures by Kraulis (1991)
  42. 10.1016/S0076-6879(97)77028-9 / Methods Enzymol / Raster3D: photorealistic molecular graphics by Merritt (1997)
Dates
Type When
Created 23 years ago (July 25, 2002, 2:21 a.m.)
Deposited 2 years, 4 months ago (April 6, 2023, 4:54 a.m.)
Indexed 1 month ago (July 20, 2025, 12:33 a.m.)
Issued 23 years, 6 months ago (Feb. 1, 2002)
Published 23 years, 6 months ago (Feb. 1, 2002)
Published Print 23 years, 6 months ago (Feb. 1, 2002)
Funders 0

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@article{Caruthers_2002, title={Helicase structure and mechanism}, volume={12}, ISSN={0959-440X}, url={http://dx.doi.org/10.1016/s0959-440x(02)00298-1}, DOI={10.1016/s0959-440x(02)00298-1}, number={1}, journal={Current Opinion in Structural Biology}, publisher={Elsevier BV}, author={Caruthers, Jonathan M and McKay, David B}, year={2002}, month=feb, pages={123–133} }