Crossref journal-article
Elsevier BV
Cell (78)
Bibliography

Solomon, M. J., Larsen, P. L., & Varshavsky, A. (1988). Mapping proteinDNA interactions in vivo with formaldehyde: Evidence that histone H4 is retained on a highly transcribed gene. Cell, 53(6), 937–947.

Authors 3
  1. Mark J. Solomon (first)
  2. Pamela L. Larsen (additional)
  3. Alexander Varshavsky (additional)
References 62 Referenced 499
  1. 10.1016/0092-8674(79)90150-8 / Cell / The induction of gene activity in Drosophila by heat shock by Ashburner (1979)
  2. 10.1016/S0021-9258(17)39663-1 / J. Biol. Chem. / Preferential localization of variant nucleosomes near the 5′-end of the mouse dihydrofolate reductase gene by Barsoum (1985)
  3. 10.1016/0092-8674(86)90835-4 / Cell / Nucleosomes are phased along the mouse β-major globin gene in erythroid and nonerythroid cells by Benezra (1986)
  4. 10.1128/JVI.35.2.371-381.1980 / J. Virol. / Efficient transcription of a compact nucleoprotein complex isolated from purified SV40 virions by Brady (1980)
  5. 10.1021/bi00836a013 / Biochemistry / Properties of formaldehyde-treated nucleohistone by Brutlag (1969)
  6. 10.1016/0022-2836(80)90397-6 / J. Mol. Biol. / Chromatin structure of the ribosomal RNA genes of Tetrahymena thermophila as analyzed by trimethylpsoralen crosslinking in vivo by Cech (1980)
  7. {'key': '10.1016/S0092-8674(88)90469-2_bib7', 'first-page': '5252', 'article-title': 'Rapid and reversible changes in nucleosome structure accompany the activation, repression, and superinduction of murine fibroblast protooncogenes c-fos and c-myc', 'volume': '84', 'author': 'Chen', 'year': '1987'} / Rapid and reversible changes in nucleosome structure accompany the activation, repression, and superinduction of murine fibroblast protooncogenes c-fos and c-myc by Chen (1987)
  8. {'key': '10.1016/S0092-8674(88)90469-2_bib8', 'first-page': '1991', 'article-title': 'Genomic sequencing', 'volume': '81', 'author': 'Church', 'year': '1984'} / Genomic sequencing by Church (1984)
  9. 10.1016/0022-2836(85)90031-2 / J. Mol. Biol. / Nucleosome disruption precedes transcription and is largely limited to the transcribed domain of globin genes in murine erythroleukemia cells by Cohen (1985)
  10. 10.1128/MCB.4.9.1853 / Mol. Cell. Biol. / High-resolution mapping of DNAase Ihypersensitive sites of Drosophila heat shock genes in Drosophila melanogaster and Saccharomyces cerevisiae by Costlow (1984)
  11. 10.3109/10409238509085135 / CRC Crit. Rev. Biochem. / The heat shock response by Craig (1985)
  12. 10.1111/j.0014-2956.1985.00575.x / Eur. J. Biochem. / Lack of nucleosomal structure in a DNAase I-solubilized transcriptionally active chromatin fraction of Physarum polycephalum by Czupryn (1985)
  13. 10.1016/S0022-2836(83)80038-2 / J. Mol. Biol. / Variegated chromatin structures of mouse ribosomal RNA genes by Davis (1983)
  14. 10.1016/0022-2836(86)90142-7 / J. Mol. Biol. / Structure of in vivo transcribing chromatin as studied in simian virus 40 minichromosomes by De Bernardin (1986)
  15. 10.1016/0003-2697(84)90381-6 / Anal. Biochem. / A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity by Feinberg (1984)
  16. 10.1016/0014-5793(74)81170-1 / FEBS Lett. / Sarkosyl activation of RNA polymerase activity in mitotic mouse cells by Gariglio (1974)
  17. {'key': '10.1016/S0092-8674(88)90469-2_bib17', 'first-page': '4275', 'article-title': 'Detecting proteinDNA interactions in vivo: distribution of RNA polymerase on specific bacterial genes', 'volume': '81', 'author': 'Gilmore', 'year': '1984'} / Detecting proteinDNA interactions in vivo: distribution of RNA polymerase on specific bacterial genes by Gilmore (1984)
  18. 10.1128/MCB.5.8.2009 / Mol. Cell. Biol. / In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster by Gilmore (1985)
  19. 10.1128/MCB.6.11.3984 / Mol. Cell. Biol. / RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells by Gilmore (1986)
  20. 10.1093/nar/11.7.2093 / Nucl. Acids Res. / Different nucleosome spacing in transcribed and non-transcribed regions of the ribosomal RNA gene in Tetrahymena thermophila by Gottschling (1983)
  21. 10.1111/j.1432-1033.1975.tb20989.x / Eur. J. Biochem. / RNA polymerase B from Drosophila melanogaster larvae: purification and partial characterization by Greenleaf (1975)
  22. 10.1016/S0021-9258(17)39577-7 / J. Biol. Chem. / Separation and partial characterization of three functional steps in transcription initiation by human RNA polymerase II by Hawley (1985)
  23. 10.1146/annurev.bi.51.070182.000513 / Annu. Rev. Biochem. / Chromatin by Igo-Kemenes (1982)
  24. 10.1016/0092-8674(80)90430-4 / Cell / Sequence of three copies of the gene for the major Drosophila heat shock induced protein and their flanking regions by Ingolia (1980)
  25. 10.1016/0092-8674(78)90278-7 / Cell / Studies on histone organization in the nucleosome using formaldehyde as a reversible cross-linking agent by Jackson (1978)
  26. 10.1021/bi00345a026 / Biochemistry / Histone synthesis and deposition in the G1 and S phases of hepatoma tissue culture cells by Jackson (1985)
  27. 10.1126/science.505006 / Science / Different nucleosome structures on transcribing and nontranscribing ribosomal gene sequences by Johnson (1979)
  28. 10.1016/0092-8674(84)90235-6 / Cell / Chromatin structure of hsp70 genes, activated by heat shock: selective removal of histones from the coding region and their absence from the 5′ region by Karpov (1984)
  29. 10.1016/0092-8674(82)90346-4 / Cell / Structure of the active nucleolar chromatin of Xenopus laevis oocytes by Labhart (1982)
  30. 10.1016/0092-8674(82)90355-5 / Cell / Selective arrangement of ubiquitinated and D1 protein-containing nucleosomes within the Drosophila genome by Levinger (1982)
  31. 10.1038/289198a0 / Nature / Chromatin fine structure of active and repressed genes by Levy (1981)
  32. 10.1146/annurev.bi.55.070186.005443 / Annu. Rev. Biochem. / The heat-shock response by Lindquist (1986)
  33. {'key': '10.1016/S0092-8674(88)90469-2_bib33', 'first-page': '5613', 'article-title': 'Sequence organization and transcription at two heat shock loci in Drosophila', 'volume': '75', 'author': 'Livak', 'year': '1978'} / Sequence organization and transcription at two heat shock loci in Drosophila by Livak (1978)
  34. 10.1093/nar/11.19.6755 / Nucl. Acids Res. / The chromatin structure of an actively expressed, single copy yeast gene by Lohr (1983)
  35. 10.1016/0092-8674(87)90561-7 / Cell / Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones by Lorch (1987)
  36. 10.1016/0092-8674(87)90338-2 / Cell / A bacteriophage RNA polymerase transcribes in vitro through a nucleosome core without displacing it by Losa (1987)
  37. {'key': '10.1016/S0092-8674(88)90469-2_bib37', 'author': 'Maniatis', 'year': '1982'} by Maniatis (1982)
  38. 10.1146/annurev.bi.49.070180.005343 / Annu. Rev. Biochem. / Nucleosome structure by McGhee (1980)
  39. {'key': '10.1016/S0092-8674(88)90469-2_bib39', 'first-page': '741', 'article-title': 'Electron microscopic analysis of chromosome metabolism in the Drosophila melanogaster embryo', 'volume': '42', 'author': 'McKnight', 'year': '1978'} / Electron microscopic analysis of chromosome metabolism in the Drosophila melanogaster embryo by McKnight (1978)
  40. 10.1016/0022-2836(82)90260-1 / J. Mol. Biol. / Organization and expression of α-tubulin genes in Drosophila melanogaster by Mischke (1982)
  41. 10.1111/j.1432-1033.1977.tb11583.x / Eur. J. Biochem. / The use of formaldehyde in RNAprotein cross-linking studies with ribosomal subunits from Escherichia coli by Moller (1977)
  42. 10.1016/0092-8674(82)90018-6 / Cell / Absence of nucleosomes in a histone-containing nucleoprotein complex obtained by dissociation of purified SV40 virions by Moyne (1982)
  43. 10.1146/annurev.cb.02.110186.001001 / Annu. Rev. Cell Biol. / Core particle, fiber, and transcriptionally active chromatin structure by Pederson (1986)
  44. 10.1016/0092-8674(83)90561-5 / Cell / Reversible changes in nucleosome structure and histone H3 accessibility in transcriptionally active and inactive states of rDNA chromatin by Prior (1983)
  45. {'key': '10.1016/S0092-8674(88)90469-2_bib45', 'first-page': '1174', 'article-title': 'Contraction ratio of the nontranscribed spacer of Xenopus rDNA chromatin', 'volume': '42', 'author': 'Reeder', 'year': '1978'} / Contraction ratio of the nontranscribed spacer of Xenopus rDNA chromatin by Reeder (1978)
  46. 10.1002/j.1460-2075.1985.tb04106.x / EMBO J. / Structural analysis of a triple complex between the histone octamer, a Xenopus gene for 5S RNA and transcription factor IIIA by Rhodes (1985)
  47. 10.1016/0092-8674(78)90327-6 / Cell / Changes of nucleosome frequency in nucleolar and non-nucleolar chromatin as a function of transcription: an electron microscopic study by Scheer (1978)
  48. 10.1016/S0021-9258(17)39323-7 / J. Biol. Chem. / Hybridization selection of covalent nucleic acidprotein complexes. 2. Cross-linking of proteins to specific Escherichia coli mRNAs and DNA sequences by formaldehyde treatment of intact cells by Schouten (1985)
  49. {'key': '10.1016/S0092-8674(88)90469-2_bib49', 'first-page': '6470', 'article-title': 'Formaldehyde-mediated DNAprotein crosslinking: a probe for in vivo chromatin structures', 'volume': '82', 'author': 'Solomon', 'year': '1985'} / Formaldehyde-mediated DNAprotein crosslinking: a probe for in vivo chromatin structures by Solomon (1985)
  50. {'key': '10.1016/S0092-8674(88)90469-2_bib50', 'first-page': '1276', 'article-title': 'A mammalian high mobility group protein recognizes any stretch of six A·T base pairs in duplex DNA', 'volume': '83', 'author': 'Solomon', 'year': '1986'} / A mammalian high mobility group protein recognizes any stretch of six A·T base pairs in duplex DNA by Solomon (1986)
  51. 10.1016/0092-8674(84)90424-0 / Cell / A protein binds to a satellite DNA repeat at three specific sites that would be brought into mutual proximity by DNA folding in the nucleosome by Strauss (1984)
  52. 10.1016/0005-2787(74)90114-2 / Biochim. Biophys. Acta / Salt treatment of chromatin induces redistribution of histones by Varshavsky (1974)
  53. {'key': '10.1016/S0092-8674(88)90469-2_bib53', 'series-title': 'Free DNA in sheared chromatin', 'first-page': '211', 'article-title': 'Studies on chromatin', 'volume': '66', 'author': 'Varshavsky', 'year': '1976'} / Free DNA in sheared chromatin / Studies on chromatin by Varshavsky (1976)
  54. 10.1016/0092-8674(79)90021-7 / Cell / A stretch of “late” SV40 viral DNA about 400 bp long which includes the origin of replication is specifically exposed in SV40 minichromosomes by Varshavsky (1979)
  55. {'key': '10.1016/S0092-8674(88)90469-2_bib55', 'first-page': '705', 'article-title': 'Assembly and propagation of repressed and derepressed chromosomal states', 'volume': '42', 'author': 'Weintraub', 'year': '1985'} / Assembly and propagation of repressed and derepressed chromosomal states by Weintraub (1985)
  56. 10.1093/nar/11.11.3593 / Nucl. Acids Res. / Protection of expressed immunoglobulin genes against nuclease cleavage by Weischet (1983)
  57. 10.1002/j.1460-2075.1984.tb02022.x / EMBO J. / Chromatin structure of a hyperactive secretory protein gene (in Balbiani ring 2) of Chironomus by Widmer (1984)
  58. 10.1016/0092-8674(86)90459-9 / Cell / A bacteriophage RNA polymerase transcribes through a Xenopus 5S RNA gene transcription complex without disrupting it by Wolffe (1986)
  59. 10.1038/286854a0 / Nature / The 5′ ends of Drosophila heat shock genes in chromatin are hypersensitive to DNAase I by Wu (1980)
  60. 10.1038/309229a0 / Nature / Two protein-binding sites in chromatin implicated in the activation of heat-shock genes by Wu (1984)
  61. 10.1016/0092-8674(79)90096-5 / Cell / The chromatin structure of specific genes II. Disruption of chromatin structure during gene activity by Wu (1979)
  62. 10.1093/nar/9.5.1053 / Nucl. Acids Res. / Stability of the primary organization of nucleosome core particles upon some conformational transitions by Zayetz (1981)
Dates
Type When
Created 20 years, 10 months ago (Oct. 4, 2004, 1:02 p.m.)
Deposited 4 years, 1 month ago (June 26, 2021, 12:42 a.m.)
Indexed 1 month, 1 week ago (July 12, 2025, 6:55 p.m.)
Issued 37 years, 2 months ago (June 1, 1988)
Published 37 years, 2 months ago (June 1, 1988)
Published Print 37 years, 2 months ago (June 1, 1988)
Funders 0

None

@article{Solomon_1988, title={Mapping proteinDNA interactions in vivo with formaldehyde: Evidence that histone H4 is retained on a highly transcribed gene}, volume={53}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/s0092-8674(88)90469-2}, DOI={10.1016/s0092-8674(88)90469-2}, number={6}, journal={Cell}, publisher={Elsevier BV}, author={Solomon, Mark J. and Larsen, Pamela L. and Varshavsky, Alexander}, year={1988}, month=jun, pages={937–947} }