DOI: 10.1016/s0022-2836(05)80360-2. Basic local alignment search tool

10.1016/s0022-2836(05)80360-2

Crossref journal-article

Elsevier BV

Journal of Molecular Biology (78)

Bibliography

Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990). Basic local alignment search tool. Journal of Molecular Biology, 215(3), 403â410.

Authors 5

Stephen F. Altschul (first)
Warren Gish (additional)
Webb Miller (additional)
Eugene W. Myers (additional)
David J. Lipman (additional)

References 23 Referenced 69,529

10.1093/comjnl/30.5.420 / Comput. J. by Coulson (1987)
{'key': '10.1016/S0022-2836(05)80360-2_bib2', 'volume': 'vol. 5', 'year': '1978'} (1978)
{'key': '10.1016/S0022-2836(05)80360-2_bib3', 'first-page': '345', 'volume': 'vol. 5', 'author': 'Dayhoff', 'year': '1978'} by Dayhoff (1978)
{'key': '10.1016/S0022-2836(05)80360-2_bib4', 'author': 'Dembo', 'year': '1991', 'journal-title': 'Ann. Prob.'} / Ann. Prob. by Dembo (1991)
10.1093/nar/10.1.247 / Nucl. Acids Res. by Goad (1982)
10.1093/nar/14.1.57 / Nucl. Acids Res. by Gotoh (1986)
{'key': '10.1016/S0022-2836(05)80360-2_bib7', 'first-page': '302', 'volume': '1', 'author': 'Hardison', 'year': '1984', 'journal-title': 'Mol. Biol. Evol.'} / Mol. Biol. Evol. by Hardison (1984)
{'key': '10.1016/S0022-2836(05)80360-2_bib8', 'series-title': 'Introduction to Automata Theory, Languages, and Computation', 'first-page': '42', 'author': 'Hopcroft', 'year': '1979'} / Introduction to Automata Theory, Languages, and Computation by Hopcroft (1979)
{'key': '10.1016/S0022-2836(05)80360-2_bib9', 'author': 'Huang', 'year': '1990', 'journal-title': 'Comput. Appl. Biosci.'} / Comput. Appl. Biosci. by Huang (1990)
10.1073/pnas.87.6.2264 / Proc. Nat. Acad. Sci., U.S.A. by Karlin (1990)
10.1214/aos/1176347616 / Ann. Stat. by Karlin (1990)
10.1126/science.2983426 / Science by Lipman (1985)
10.1016/0022-2836(89)90362-8 / J. Mol. Biol. by Margot (1989)
10.1002/j.1538-7305.1955.tb03788.x / Bell System Tech. J. by Mealy (1955)
10.1016/0022-2836(70)90057-4 / J. Mol. Biol. by Needleman (1970)
10.1073/pnas.85.8.2444 / Proc. Nat. Acad. Sci., U.S.A. by Pearson (1988)
{'key': '10.1016/S0022-2836(05)80360-2_bib17', 'author': 'Sankoff', 'year': '1983'} by Sankoff (1983)
10.1137/0126070 / SIAM J. Appl. Math. by Sellers (1974)
10.1007/BF02459499 / Bull. Math. Biol. by Sellers (1984)
10.1073/pnas.87.1.118 / Proc. Nat. Acad. Sci., U.S.A. by Smith (1990)
10.1016/0196-8858(81)90046-4 / Advan. Appl. Math. by Smith (1981)
10.1126/science.172.3988.1089 / Science by Uzzell (1971)
10.1007/BF02459498 / Bull. Math. Biol. by Waterman (1984)

Dates

Type	When
Created	18 years, 6 months ago (Feb. 7, 2007, 7:54 a.m.)
Deposited	6 years, 7 months ago (Jan. 9, 2019, 6:53 a.m.)
Indexed	3 hours, 2 minutes ago (Aug. 26, 2025, 3:17 a.m.)
Issued	34 years, 10 months ago (Oct. 1, 1990)
Published	34 years, 10 months ago (Oct. 1, 1990)
Published Print	34 years, 10 months ago (Oct. 1, 1990)

Funders 0

None

BibTeX

@article{Altschul_1990, title={Basic local alignment search tool}, volume={215}, ISSN={0022-2836}, url={http://dx.doi.org/10.1016/s0022-2836(05)80360-2}, DOI={10.1016/s0022-2836(05)80360-2}, number={3}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Altschul, Stephen F. and Gish, Warren and Miller, Webb and Myers, Eugene W. and Lipman, David J.}, year={1990}, month=oct, pages={403–410} }

JSON

{
  "indexed": {
    "date-parts": [
      [
        2025,
        8,
        26
      ]
    ],
    "date-time": "2025-08-26T07:17:48Z",
    "timestamp": 1756192668351
  },
  "reference-count": 23,
  "publisher": "Elsevier BV",
  "issue": "3",
  "license": [
    {
      "start": {
        "date-parts": [
          [
            1990,
            10,
            1
          ]
        ],
        "date-time": "1990-10-01T00:00:00Z",
        "timestamp": 654739200000
      },
      "content-version": "tdm",
      "delay-in-days": 0,
      "URL": "https://www.elsevier.com/tdm/userlicense/1.0/"
    }
  ],
  "content-domain": {
    "domain": [],
    "crossmark-restriction": false
  },
  "published-print": {
    "date-parts": [
      [
        1990,
        10
      ]
    ]
  },
  "DOI": "10.1016/s0022-2836(05)80360-2",
  "type": "journal-article",
  "created": {
    "date-parts": [
      [
        2007,
        2,
        7
      ]
    ],
    "date-time": "2007-02-07T12:54:11Z",
    "timestamp": 1170852851000
  },
  "page": "403-410",
  "source": "Crossref",
  "is-referenced-by-count": 69529,
  "title": "Basic local alignment search tool",
  "prefix": "10.1016",
  "volume": "215",
  "author": [
    {
      "given": "Stephen F.",
      "family": "Altschul",
      "sequence": "first",
      "affiliation": []
    },
    {
      "given": "Warren",
      "family": "Gish",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Webb",
      "family": "Miller",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Eugene W.",
      "family": "Myers",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "David J.",
      "family": "Lipman",
      "sequence": "additional",
      "affiliation": []
    }
  ],
  "member": "78",
  "reference": [
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib1",
      "doi-asserted-by": "crossref",
      "first-page": "420",
      "DOI": "10.1093/comjnl/30.5.420",
      "volume": "30",
      "author": "Coulson",
      "year": "1987",
      "journal-title": "Comput. J."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib2",
      "volume": "vol. 5",
      "year": "1978"
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib3",
      "first-page": "345",
      "volume": "vol. 5",
      "author": "Dayhoff",
      "year": "1978"
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib4",
      "author": "Dembo",
      "year": "1991",
      "journal-title": "Ann. Prob."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib5",
      "doi-asserted-by": "crossref",
      "first-page": "247",
      "DOI": "10.1093/nar/10.1.247",
      "volume": "10",
      "author": "Goad",
      "year": "1982",
      "journal-title": "Nucl. Acids Res."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib6",
      "doi-asserted-by": "crossref",
      "first-page": "57",
      "DOI": "10.1093/nar/14.1.57",
      "volume": "14",
      "author": "Gotoh",
      "year": "1986",
      "journal-title": "Nucl. Acids Res."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib7",
      "first-page": "302",
      "volume": "1",
      "author": "Hardison",
      "year": "1984",
      "journal-title": "Mol. Biol. Evol."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib8",
      "series-title": "Introduction to Automata Theory, Languages, and Computation",
      "first-page": "42",
      "author": "Hopcroft",
      "year": "1979"
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib9",
      "author": "Huang",
      "year": "1990",
      "journal-title": "Comput. Appl. Biosci."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib10",
      "doi-asserted-by": "crossref",
      "first-page": "2264",
      "DOI": "10.1073/pnas.87.6.2264",
      "volume": "87",
      "author": "Karlin",
      "year": "1990",
      "journal-title": "Proc. Nat. Acad. Sci., U.S.A."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib11",
      "doi-asserted-by": "crossref",
      "first-page": "571",
      "DOI": "10.1214/aos/1176347616",
      "volume": "18",
      "author": "Karlin",
      "year": "1990",
      "journal-title": "Ann. Stat."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib12",
      "doi-asserted-by": "crossref",
      "first-page": "1435",
      "DOI": "10.1126/science.2983426",
      "volume": "227",
      "author": "Lipman",
      "year": "1985",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib13",
      "doi-asserted-by": "crossref",
      "first-page": "15",
      "DOI": "10.1016/0022-2836(89)90362-8",
      "volume": "205",
      "author": "Margot",
      "year": "1989",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib14",
      "doi-asserted-by": "crossref",
      "first-page": "1045",
      "DOI": "10.1002/j.1538-7305.1955.tb03788.x",
      "volume": "34",
      "author": "Mealy",
      "year": "1955",
      "journal-title": "Bell System Tech. J."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib15",
      "doi-asserted-by": "crossref",
      "first-page": "443",
      "DOI": "10.1016/0022-2836(70)90057-4",
      "volume": "48",
      "author": "Needleman",
      "year": "1970",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib16",
      "doi-asserted-by": "crossref",
      "first-page": "2444",
      "DOI": "10.1073/pnas.85.8.2444",
      "volume": "85",
      "author": "Pearson",
      "year": "1988",
      "journal-title": "Proc. Nat. Acad. Sci., U.S.A."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib17",
      "author": "Sankoff",
      "year": "1983"
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib18",
      "doi-asserted-by": "crossref",
      "first-page": "787",
      "DOI": "10.1137/0126070",
      "volume": "26",
      "author": "Sellers",
      "year": "1974",
      "journal-title": "SIAM J. Appl. Math."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib19",
      "doi-asserted-by": "crossref",
      "first-page": "501",
      "DOI": "10.1007/BF02459499",
      "volume": "46",
      "author": "Sellers",
      "year": "1984",
      "journal-title": "Bull. Math. Biol."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib20",
      "doi-asserted-by": "crossref",
      "first-page": "118",
      "DOI": "10.1073/pnas.87.1.118",
      "volume": "87",
      "author": "Smith",
      "year": "1990",
      "journal-title": "Proc. Nat. Acad. Sci., U.S.A."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib21",
      "doi-asserted-by": "crossref",
      "first-page": "482",
      "DOI": "10.1016/0196-8858(81)90046-4",
      "volume": "2",
      "author": "Smith",
      "year": "1981",
      "journal-title": "Advan. Appl. Math."
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib22",
      "doi-asserted-by": "crossref",
      "first-page": "1089",
      "DOI": "10.1126/science.172.3988.1089",
      "volume": "172",
      "author": "Uzzell",
      "year": "1971",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/S0022-2836(05)80360-2_bib23",
      "doi-asserted-by": "crossref",
      "first-page": "473",
      "DOI": "10.1007/BF02459498",
      "volume": "46",
      "author": "Waterman",
      "year": "1984",
      "journal-title": "Bull. Math. Biol."
    }
  ],
  "container-title": "Journal of Molecular Biology",
  "original-title": [],
  "language": "en",
  "link": [
    {
      "URL": "https://api.elsevier.com/content/article/PII:S0022283605803602?httpAccept=text/xml",
      "content-type": "text/xml",
      "content-version": "vor",
      "intended-application": "text-mining"
    },
    {
      "URL": "https://api.elsevier.com/content/article/PII:S0022283605803602?httpAccept=text/plain",
      "content-type": "text/plain",
      "content-version": "vor",
      "intended-application": "text-mining"
    }
  ],
  "deposited": {
    "date-parts": [
      [
        2019,
        1,
        9
      ]
    ],
    "date-time": "2019-01-09T11:53:52Z",
    "timestamp": 1547034832000
  },
  "score": 1,
  "resource": {
    "primary": {
      "URL": "https://linkinghub.elsevier.com/retrieve/pii/S0022283605803602"
    }
  },
  "subtitle": [],
  "short-title": [],
  "issued": {
    "date-parts": [
      [
        1990,
        10
      ]
    ]
  },
  "references-count": 23,
  "journal-issue": {
    "issue": "3",
    "published-print": {
      "date-parts": [
        [
          1990,
          10
        ]
      ]
    }
  },
  "alternative-id": [
    "S0022283605803602"
  ],
  "URL": "http://dx.doi.org/10.1016/S0022-2836(05)80360-2",
  "relation": {},
  "ISSN": [
    "0022-2836"
  ],
  "subject": [],
  "container-title-short": "Journal of Molecular Biology",
  "published": {
    "date-parts": [
      [
        1990,
        10
      ]
    ]
  }
}