Bibliography
Niedzwiecka, A., Marcotrigiano, J., Stepinski, J., Jankowska-Anyszka, M., Wyslouch-Cieszynska, A., Dadlez, M., Gingras, A.-C., Mak, P., Darzynkiewicz, E., Sonenberg, N., Burley, S. K., & Stolarski, R. (2002). Biophysical Studies of eIF4E Cap-binding Protein: Recognition of mRNA 5â² Cap Structure and Synthetic Fragments of eIF4G and 4E-BP1 Proteins. Journal of Molecular Biology, 319(3), 615â635.
Authors
12
- Anna Niedzwiecka (first)
- Joseph Marcotrigiano (additional)
- Janusz Stepinski (additional)
- Marzena Jankowska-Anyszka (additional)
- Aleksandra Wyslouch-Cieszynska (additional)
- Michal Dadlez (additional)
- Anne-Claude Gingras (additional)
- Pawel Mak (additional)
- Edward Darzynkiewicz (additional)
- Nahum Sonenberg (additional)
- Stephen K. Burley (additional)
- Ryszard Stolarski (additional)
References
90
Referenced
339
10.1038/255033a0
/ Nature / 5′-Terminal 7-methylguanosine in eukaryotic mRNA is required for translation by Muthukrishnan (1975)10.1016/S0079-6603(08)60614-5
/ Prog. Nucl. Acid Res. Mol. Biol. / Cap-binding proteins of eukaryotic messenger RNA: functions in initiation and control of translation by Sonenberg (1988)10.1016/0092-8674(84)90268-X
/ Cell / Recognition of cap structure in splicing in vitro of mRNA precursors by Konarska (1984)10.1016/0092-8674(94)90530-4
/ Cell / A nuclear cap binding protein complex involved in pre-mRNA splicing by Izaurralde (1994)10.1083/jcb.118.6.1287
/ J. Cell Biol. / A cap binding protein that may mediate nuclear export of RNA polymerase II-transcribed RNAs by Izaurralde (1992){'key': '10.1016/S0022-2836(02)00328-5_BIB6', 'first-page': '245', 'article-title': 'mRNA 5′ cap-binding protein eIF4E and control of cell growth', 'author': 'Sonenberg', 'year': '1996'}
/ mRNA 5′ cap-binding protein eIF4E and control of cell growth by Sonenberg (1996)10.1126/science.275.5299.500
/ Science / eIF4G: a multipurpose ribosome adapter? by Hentze (1997)10.1016/S0092-8674(00)80268-8
/ Cell / Starting at the beginning, middle, and end: translation initiation in eukaryotes by Sachs (1997)10.1093/emboj/17.24.7480
/ Eur. Mol. Biol. Org. J. / A newly identified N-terminal amino acid sequence of human eIF4G binds poly(A)-binding protein and functions in poly(A)-dependent translation by Imataka (1998)10.1128/MCB.18.1.334
/ Mol. Cell. Biol. / A novel functional human eukaryotic translation initiation factor 4G by Gradi (1998)10.1016/S0092-8674(00)80280-9
/ Cell / Cocrystal structure of the messenger RNA 5′ cap-binding protein (eIF4E) bound to 7-methyl-GDP by Marcotrigiano (1997)10.1038/nsb0997-717
/ Nature Struct. Biol. / Structure of translation factor eIF4E bound to m7GDP and interaction with 4E-binding protein by Matsuo (1997)10.1016/S0021-9258(19)77888-0
/ J. Biol. Chem. / Circular dichroism and fluorescence studies on protein synthesis initiation factor eIF-4E and two mutant forms from the yeast Saccharomyces cerevisiae by McCubbin (1988)10.1021/bi00446a017
/ Biochemistry / A spectroscopic study of the binding of m7GTP and m7GpppG to human protein synthesis initiation factor 4E by Carberry (1989)10.1093/oxfordjournals.jbchem.a123475
/ J. Biochem. (Tokyo) / Expression of a synthetic gene for human cap binding protein (human IF-4E) in Escherichia coli and fluorescence studies on interaction with mRNA cap structure analogues by Ueda (1991)10.1093/oxfordjournals.jbchem.a124581
/ J. Biochem. (Tokyo) / Direct expression of a synthetic gene in Escherichia coli: purification and physicochemical properties of human initiation factor 4E by Morino (1994)10.1006/prep.1996.0661
/ Protein Expt. Purif. / Expression of functional eIF-4E human: purification, detailed characterization, and its use in isolating eIF-4E binding proteins by Hagedorn (1997)10.1515/znc-1999-3-420
/ Z. Naturforsch. [C.] / Fluorescence studies on association of human translation initiation factor eIF4E with mRNA cap-analogues by Wieczorek (1999)10.1135/css199902214
/ Collect. Symp. Ser. / Spectroscopic studies on association of mRNA cap-analogues with human translation factor eIF4E. From modelling of interactions to inhibitory properties by Niedzwiecka-Kornas (1999)10.1021/bi000623p
/ Biochemistry / Structural requirements for the specific recognition of an m7G mRNA cap by Hsu (2000)10.1021/bi9830213
/ Biochemistry / Quantitative assessment of mRNA cap analogues as inhibitors of in vitro translation by Cai (1999)10.1146/annurev.biochem.68.1.913
/ Annu. Rev. Biochem. / eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation by Gingras (1999)10.1016/S1357-2725(98)00131-9
/ Int. J. Biochem. Cell Biol. / eIF4E activity is regulated at multiple levels by Raught (1999)10.1002/j.1460-2075.1995.tb00257.x
/ Eur. Mol. Biol. Org. J. / Repression of cap-dependent translation by 4E-binding protein 1: competition with p220 for binding to eukaryotic initiation factor-4E by Haghighat (1995)10.1128/MCB.15.9.4990
/ Mol. Cell. Biol. / The translation initiation factor eIF-4E binds to a common motif shared by the translation factor eIF-4 gamma and the translational repressors 4E-binding proteins by Mader (1995)10.1093/emboj/16.5.1114
/ Eur. Mol. Biol. Org. J. / A novel inhibitor of cap-dependent translation initiation in yeast: p20 competes with eIF4G for binding to eIF4E by Altmann (1997)10.1038/371762a0
/ Nature / Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5′-cap function by Pause (1994)10.1074/jbc.273.22.14002
/ J. Biol. Chem. / 4E-BP3, a new member of the eukaryotic initiation factor 4E-binding protein family by Poulin (1998)10.1016/S1097-2765(01)80003-4
/ Mol. Cell / Cap-dependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G by Marcotrigiano (1999)10.1101/gad.13.11.1422
/ Genes Dev. / Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism by Gingras (1999)10.1101/gad.912401
/ Genes Dev. / Hierarchical phosphorylation of the translation inhibitor 4E-BP1 by Gingras (2001)10.1074/jbc.M006005200
/ J. Biol. Chem. / Mammalian target of rapamycin-dependent phosphorylation of PHAS-I in four (S/T)P sites detected by phospho-specific antibodies by Mothe-Satney (2000)10.1074/jbc.M011068200
/ J. Biol. Chem. / A quantitative molecular model for modulation of mammalian translation by the eIF4E-binding protein 1 by Karim (2001)10.1128/MCB.20.10.3558-3567.2000
/ Mol. Cell. Biol. / Multiple mechanisms control phosphorylation of PHAS-I in five (S/T)P sites that govern translational repression by Mothe-Satney (2000)10.1101/gad.887201
/ Genes Dev. / Regulation of translation initiation by FRAP/mTOR by Gingras (2001)10.1093/emboj/18.14.4068
/ Eur. Mol. Biol. Org. J. / Repressor binding to a dorsal regulatory site traps human eIF4E in a high cap-affinity state by Ptushkina (1999)10.1093/emboj/17.16.4798
/ Eur. Mol. Biol. Org. J. / Cooperative modulation by eIF4G of eIF4E-binding to the mRNA 5′ cap in yeast involves a site partially shared by p20 by Ptushkina (1998)10.1074/jbc.M004565200
/ J. Biol. Chem. / Stabilization of eukaryotic initiation factor 4E binding to the mRNA 5′-cap by domains of eIF4G by von der Haar (2000)10.1093/protein/4.2.155
/ Protein Eng. / Correlation between stability of a protein and its dipeptide composition: a novel approach for predicting in vivo stability of a protein from its primary sequence by Guruprasad (1990)10.1006/bbrc.1998.8761
/ Biochem. Biophys. Res. Commun. / Effect of mRNA cap structure on eIF-4E phosphorylation and cap binding analyses using Ser209-mutated eIF-4Es by Shibata (1998)10.1006/jmbi.2001.5003
/ J. Mol. Biol. / The ring domains of the promyelocytic leukemia protein PML and the arenaviral protein Z repress translation by directly inhibiting translation initiation factor eIF4E by Kentsis (2001)10.1038/251385a0
/ Nature / Model for the regulation of mRNA translation applied to haemoglobin synthesis by Lodish (1974)10.1021/bi00542a028
/ Biochemistry / Inhibition of cell-free messenger ribonucleic acid translation by 7-methylguanosine 5′-triphosphate: effect of messenger ribonucleic acid concentration by Chu (1980)10.1016/S0021-9258(19)75938-9
/ J. Biol. Chem. / Regulated phosphorylation and low abundance of HeLa cell initiation factor eIF-4F suggest a role in translational control. Heat shock effects on eIF-4F by Duncan (1987)10.1074/jbc.271.15.8983
/ J. Biol. Chem. / A reevaluation of the cap-binding protein, eIF4E, as a rate-limiting factor for initiation of translation in reticulocyte lysate by Rau (1996)10.1016/S0021-9258(17)39529-7
/ J. Biol. Chem. / Immunological detection of the messenger RNA cap-binding protein by Hiremath (1985)10.1074/jbc.272.35.21677
/ J. Biol. Chem. / eIF4G dramatically enhances the binding of eIF4E to the mRNA 5′-cap structure by Haghighat (1997)10.1016/1011-1344(94)07098-9
/ J. Photochem. Photobiol. B / Fluorescence and absorption spectroscopic properties of RNA 5′-cap analogues derived from 7-methyl-N2,7-dimethyl- and N2,N2,7-trimethyl-guanosines by Wieczorek (1995)10.1073/pnas.96.13.7149
/ Proc. Natl Acad. Sci. USA / mRNA cap recognition: dominant role of enhanced stacking interactions between methylated bases and protein aromatic side chains by Hu (1999)10.1016/S0092-8674(00)81101-0
/ Cell / The 1.85Å structure of vaccinia protein VP39: a bifunctional enzyme that participates in the modification of both mRNA ends by Hodel (1996)10.1016/S0959-440X(99)00053-6
/ Curr. Opin. Struct. Biol. / Structural basis of mRNA cap recognition by proteins by Quiocho (2000){'key': '10.1016/S0022-2836(02)00328-5_BIB52', 'first-page': '245', 'article-title': 'Regulation of ribosomal recruitment in eukaryotes', 'author': 'Raught', 'year': '2000'}
/ Regulation of ribosomal recruitment in eukaryotes by Raught (2000)10.1021/bi00135a019
/ Biochemistry / Thermodynamics of ribonuclease T1 denaturation by Hu (1992)10.1096/fasebj.10.1.8566551
/ FASEB J. / Forces contributing to the conformational stability of proteins by Pace (1996)10.1016/0076-6879(91)08018-D
/ Methods Enzymol. / Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA by Record (1991)10.1073/pnas.97.8.3987
/ Proc. Natl Acad. Sci. USA / Osmotic stress, crowding, preferential hydration, and binding: a comparison of perspectives by Parsegian (2000)10.1016/0076-6879(95)59039-0
/ Methods Enzymol. / Macromolecules and water: probing with osmotic stress by Parsegian (1995)10.1021/bi952812r
/ Biochemistry / Parsing the free energy of anthracycline antibiotic binding to DNA by Chaires (1996){'key': '10.1016/S0022-2836(02)00328-5_BIB59', 'series-title': 'Ion Association', 'author': 'Davies', 'year': '1962'}
/ Ion Association by Davies (1962){'key': '10.1016/S0022-2836(02)00328-5_BIB60', 'series-title': 'Electrolyte Solutions', 'author': 'Robinson', 'year': '1970'}
/ Electrolyte Solutions by Robinson (1970)10.1016/S0065-3233(08)60190-4
/ Advan. Protein Chem. / Linked functions and reciprocal effects in hemoglobin: a second look by Wyman (1964){'key': '10.1016/S0022-2836(02)00328-5_BIB62', 'volume': 'vol. 2', 'author': 'Dawson', 'year': '1969'}
by Dawson (1969)10.1006/bbrc.2001.4766
/ Biochem. Biophys. Res. Commun. / Cation radius effects on cell-free translation in rabbit reticulocyte lysate by Hempel (2001)10.1007/s002490000096
/ Eur. Biophys. J. / Stopped-flow and Brownian dynamics studies of electrostatic effects in the kinetics of binding of 7-methyl-GpppG to the protein eIF4E by Blachut-Okrasinska (2000)10.1093/emboj/18.1.270
/ Eur. Mol. Biol. Org. J. / Human eukaryotic translation initiation factor 4G (eIF4G) recruits mnk1 to phosphorylate eIF4E by Pyronnet (1999)10.1128/MCB.19.3.1871
/ Mol. Cell Biol. / Phosphorylation of the cap-binding protein eukaryotic translation initiation factor 4E by protein kinase Mnkl in vivo by Waskiewicz (1999)10.1074/jbc.M103607200
/ J. Biol. Chem. / Phosphorylation of eukaryotic initiation factor 4E markedly reduces its affinity for capped mRNA by Scheper (2002)10.1016/0022-2836(92)90504-D
/ J. Mol. Biol. / Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA. Possible thermodynamic origins of the glutamate effect on protein–DNA interactions by Ha (1992)10.1126/science.1585178
/ Science / Protein solvation in allosteric regulation: a water effect on hemoglobin by Colombo (1992)10.1073/pnas.91.22.10517
/ Proc. Natl Acad. Sci. USA / Reevaluation of chloride's regulation of hemoglobin oxygen uptake: the neglected contribution of protein hydration in allosterism by Colombo (1994)10.1021/ja002793v
/ J. Am. Chem. Soc. / Hydration changes for DNA intercalation reactions by Qu (2001)10.1017/S003358350000202X
/ Q. Rev. Biophys. / Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity by Record (1978)10.1146/annurev.bb.16.060187.000521
/ Annu. Rev. Biophys. Biophys. Chem. / Structure and dynamics of water surrounding biomolecules by Saenger (1987)10.1021/bi00295a007
/ Biochemistry / Translational recognition of messenger ribonucleic acid caps as a function of pH by Rhoads (1983)- Niedzwiecka-Kornas, A., Chlebicka, L., Jankowska-Anyszka, M., Stepinski, J., Dadlez, M., Gingras, A.C. et al. (1999). RNA Meeting Abstract'99.
10.1093/oxfordjournals.jbchem.a022532
/ J. Biochem. (Tokyo) / Binding analysis of Xenopus laevis translation initiation factor 4E (eIF4E) in initiation complex formation by Miyoshi (1999)10.1021/bi00328a020
/ Biochemistry / Chemical synthesis and characterization of 7-methylguanosine cap analogues by Darzynkiewicz (1985)10.1135/cccc1993s138
/ Collect. Czech. Chem. Commun. / Synthesis and properties of new NH2 and N7 substituted GMP and GTP 5′-mRNA cap analogues by Jankowska (1993)10.1093/nar/16.18.8953
/ Nucl. Acids Res. / Beta-globin mRNAs capped with m7G, m2.7(2)G or m2.2.7(3)G differ in intrinsic translation efficiency by Darzynkiewicz (1988)10.1080/15257779508012457
/ Nucleosides Nucleotides / Synthesis and properties of P1,P2-, P1,P3- and P1,P4-dinucleotide di-, tri- and tetraphosphate mRNA 5′-cap analogues by Stepinski (1995)10.1135/cccc1996s197
/ Collect. Czech. Chem. Commun. / H-1 NMR and fluorescence studies of new mRNA 5′-cap analogues by Jankowska (1996)10.1080/07328319008045191
/ Nucleosides Nucleotides / Synthesis, conformation and hydrolytic stability of P1,P3-dinucleoside triphosphate groups related to mRNA 5′-cap, and comparative kinetic studies on their nucleoside and nucleoside monophosphate analogues by Darzynkiewicz (1990)10.1016/0378-1119(88)90184-9
/ Gene / High-level synthesis in Escherichia coli of functional cap-binding eukaryotic initiation factor eIF-4E and affinity purification using a simplified cap-analogue resin by Edery (1988)10.1111/j.1399-3011.1992.tb00291.x
/ Int. J. Pept. Protein Res. / In situ neutralization in Boc-chemistry solid phase peptide synthesis. Rapid, high yield assembly of difficult sequences by Schnolzer (1992)10.1246/cl.1994.1099
/ Chem. Letters / An efficient procedure for solid-phase synthesis of phosphopeptides by Fmoc strategy by Wakamiya (1994){'key': '10.1016/S0022-2836(02)00328-5_BIB86', 'series-title': 'Photoluminescence of Solutions', 'author': 'Parker', 'year': '1968'}
/ Photoluminescence of Solutions by Parker (1968){'key': '10.1016/S0022-2836(02)00328-5_BIB87', 'volume': 'vol. 28', 'author': 'Beyer', 'year': '1987'}
by Beyer (1987){'key': '10.1016/S0022-2836(02)00328-5_BIB88', 'series-title': 'An Introduction to Error Analysis', 'author': 'Taylor', 'year': '1982'}
/ An Introduction to Error Analysis by Taylor (1982){'key': '10.1016/S0022-2836(02)00328-5_BIB89', 'series-title': 'Ion Properties', 'author': 'Marcus', 'year': '1997'}
/ Ion Properties by Marcus (1997)10.1016/S0076-6879(97)76066-X
/ Methods Enzymol. / Processing of X-ray diffraction data collected in oscillation mode by Otwinowski (1997)
Dates
Type | When |
---|---|
Created | 22 years, 10 months ago (Oct. 11, 2002, 7:14 a.m.) |
Deposited | 2 years, 4 months ago (April 17, 2023, 10:57 p.m.) |
Indexed | 1 week, 2 days ago (Aug. 29, 2025, 5:57 a.m.) |
Issued | 23 years, 3 months ago (June 1, 2002) |
Published | 23 years, 3 months ago (June 1, 2002) |
Published Print | 23 years, 3 months ago (June 1, 2002) |
@article{Niedzwiecka_2002, title={Biophysical Studies of eIF4E Cap-binding Protein: Recognition of mRNA 5′ Cap Structure and Synthetic Fragments of eIF4G and 4E-BP1 Proteins}, volume={319}, ISSN={0022-2836}, url={http://dx.doi.org/10.1016/s0022-2836(02)00328-5}, DOI={10.1016/s0022-2836(02)00328-5}, number={3}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Niedzwiecka, Anna and Marcotrigiano, Joseph and Stepinski, Janusz and Jankowska-Anyszka, Marzena and Wyslouch-Cieszynska, Aleksandra and Dadlez, Michal and Gingras, Anne-Claude and Mak, Pawel and Darzynkiewicz, Edward and Sonenberg, Nahum and Burley, Stephen K. and Stolarski, Ryszard}, year={2002}, month=jun, pages={615–635} }