DOI: 10.1016/s0009-2614(97)01074-9. Flexible docking of a ligand peptide to a receptor protein by multicanonical molecular dynamics simulation

Flexible docking of a ligand peptide to a receptor protein by multicanonical molecular dynamics simulation

10.1016/s0009-2614(97)01074-9

Crossref journal-article

Elsevier BV

Chemical Physics Letters (78)

Bibliography

Nakajima, N., Higo, J., Kidera, A., & Nakamura, H. (1997). Flexible docking of a ligand peptide to a receptor protein by multicanonical molecular dynamics simulation. Chemical Physics Letters, 278(4â6), 297â301.

Authors 4

Nobuyuki Nakajima (first)
Junichi Higo (additional)
Akinori Kidera (additional)
Haruki Nakamura (additional)

References 19 Referenced 76

10.1016/0022-2836(82)90153-X / J. Mol. Biol. by Kuntz (1982)
10.1016/S0022-2836(05)80038-5 / J. Mol. Biol. by Leach (1994)
10.1146/annurev.bb.24.060195.003333 / Annu. Rev. Biophys. Biomol. Struct. by Rosenfeld (1995)
10.1016/S0959-440X(96)80061-3 / Curr. Opin. Struct. Biol. by Lengauer (1996)
10.1021/jp962142e / J. Phys. Chem. B. by Nakajima (1997)
10.1016/0370-2693(91)91256-U / Phys. Lett. B by Berg (1991)
10.1002/jcc.540141110 / J. Comput. Chem. by Hansmann (1993)
{'key': '10.1016/S0009-2614(97)01074-9_BIB8', 'first-page': '9886', 'volume': '92', 'author': 'Kidera', 'year': '1995'} by Kidera (1995)
10.1016/0009-2614(96)00761-0 / Chem. Phys. Lett. by Hansmann (1996)
10.1016/0092-8674(94)90367-0 / Cell by Yu (1994)
10.1038/nsb0894-546 / Nature Struct. Biol. by Musacchio (1994)
10.1126/science.7526465 / Science by Feng (1994)
10.1038/385595a0 / Nature (London) by Xu (1997)
10.1038/385602a0 / Nature (London) by Sicheri (1997)
10.1103/PhysRevLett.48.1818 / Phys. Rev. Lett. by Hoover (1982)
10.1016/0375-9601(83)90256-6 / Phys. Lett. A by Evans (1983)
10.1016/0097-8485(92)80010-W / Comput. Chem. by Morikami (1992)
10.1002/jcc.540070216 / J. Comput. Chem. by Weiner (1986)
10.1038/372375a0 / Nature (London) by Lim (1994)

Dates

Type	When
Created	23 years, 1 month ago (July 25, 2002, 5:41 p.m.)
Deposited	6 years, 4 months ago (April 15, 2019, 5:28 a.m.)
Indexed	1 month, 3 weeks ago (July 2, 2025, 1:50 p.m.)
Issued	27 years, 10 months ago (Oct. 1, 1997)
Published	27 years, 10 months ago (Oct. 1, 1997)
Published Print	27 years, 10 months ago (Oct. 1, 1997)

Funders 0

None

BibTeX

@article{Nakajima_1997, title={Flexible docking of a ligand peptide to a receptor protein by multicanonical molecular dynamics simulation}, volume={278}, ISSN={0009-2614}, url={http://dx.doi.org/10.1016/s0009-2614(97)01074-9}, DOI={10.1016/s0009-2614(97)01074-9}, number={4–6}, journal={Chemical Physics Letters}, publisher={Elsevier BV}, author={Nakajima, Nobuyuki and Higo, Junichi and Kidera, Akinori and Nakamura, Haruki}, year={1997}, month=oct, pages={297–301} }

JSON

{
  "indexed": {
    "date-parts": [
      [
        2025,
        7,
        2
      ]
    ],
    "date-time": "2025-07-02T17:50:59Z",
    "timestamp": 1751478659398
  },
  "reference-count": 19,
  "publisher": "Elsevier BV",
  "issue": "4-6",
  "license": [
    {
      "start": {
        "date-parts": [
          [
            1997,
            10,
            1
          ]
        ],
        "date-time": "1997-10-01T00:00:00Z",
        "timestamp": 875664000000
      },
      "content-version": "tdm",
      "delay-in-days": 0,
      "URL": "https://www.elsevier.com/tdm/userlicense/1.0/"
    }
  ],
  "content-domain": {
    "domain": [],
    "crossmark-restriction": false
  },
  "published-print": {
    "date-parts": [
      [
        1997,
        10
      ]
    ]
  },
  "DOI": "10.1016/s0009-2614(97)01074-9",
  "type": "journal-article",
  "created": {
    "date-parts": [
      [
        2002,
        7,
        25
      ]
    ],
    "date-time": "2002-07-25T21:41:10Z",
    "timestamp": 1027633270000
  },
  "page": "297-301",
  "source": "Crossref",
  "is-referenced-by-count": 76,
  "title": "Flexible docking of a ligand peptide to a receptor protein by multicanonical molecular dynamics simulation",
  "prefix": "10.1016",
  "volume": "278",
  "author": [
    {
      "given": "Nobuyuki",
      "family": "Nakajima",
      "sequence": "first",
      "affiliation": []
    },
    {
      "given": "Junichi",
      "family": "Higo",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Akinori",
      "family": "Kidera",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Haruki",
      "family": "Nakamura",
      "sequence": "additional",
      "affiliation": []
    }
  ],
  "member": "78",
  "reference": [
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB1",
      "doi-asserted-by": "crossref",
      "first-page": "269",
      "DOI": "10.1016/0022-2836(82)90153-X",
      "volume": "161",
      "author": "Kuntz",
      "year": "1982",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB2",
      "doi-asserted-by": "crossref",
      "first-page": "345",
      "DOI": "10.1016/S0022-2836(05)80038-5",
      "volume": "235",
      "author": "Leach",
      "year": "1994",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB3",
      "doi-asserted-by": "crossref",
      "first-page": "677",
      "DOI": "10.1146/annurev.bb.24.060195.003333",
      "volume": "24",
      "author": "Rosenfeld",
      "year": "1995",
      "journal-title": "Annu. Rev. Biophys. Biomol. Struct."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB4",
      "doi-asserted-by": "crossref",
      "first-page": "402",
      "DOI": "10.1016/S0959-440X(96)80061-3",
      "volume": "6",
      "author": "Lengauer",
      "year": "1996",
      "journal-title": "Curr. Opin. Struct. Biol."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB5",
      "doi-asserted-by": "crossref",
      "first-page": "817",
      "DOI": "10.1021/jp962142e",
      "volume": "101",
      "author": "Nakajima",
      "year": "1997",
      "journal-title": "J. Phys. Chem. B."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB6",
      "doi-asserted-by": "crossref",
      "first-page": "249",
      "DOI": "10.1016/0370-2693(91)91256-U",
      "volume": "267",
      "author": "Berg",
      "year": "1991",
      "journal-title": "Phys. Lett. B"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB7",
      "doi-asserted-by": "crossref",
      "first-page": "1333",
      "DOI": "10.1002/jcc.540141110",
      "volume": "14",
      "author": "Hansmann",
      "year": "1993",
      "journal-title": "J. Comput. Chem."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB8",
      "first-page": "9886",
      "volume": "92",
      "author": "Kidera",
      "year": "1995"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB9",
      "doi-asserted-by": "crossref",
      "first-page": "321",
      "DOI": "10.1016/0009-2614(96)00761-0",
      "volume": "259",
      "author": "Hansmann",
      "year": "1996",
      "journal-title": "Chem. Phys. Lett."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB10",
      "doi-asserted-by": "crossref",
      "first-page": "933",
      "DOI": "10.1016/0092-8674(94)90367-0",
      "volume": "76",
      "author": "Yu",
      "year": "1994",
      "journal-title": "Cell"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB11",
      "doi-asserted-by": "crossref",
      "first-page": "546",
      "DOI": "10.1038/nsb0894-546",
      "volume": "1",
      "author": "Musacchio",
      "year": "1994",
      "journal-title": "Nature Struct. Biol."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB12",
      "doi-asserted-by": "crossref",
      "first-page": "1241",
      "DOI": "10.1126/science.7526465",
      "volume": "266",
      "author": "Feng",
      "year": "1994",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB13",
      "doi-asserted-by": "crossref",
      "first-page": "595",
      "DOI": "10.1038/385595a0",
      "volume": "385",
      "author": "Xu",
      "year": "1997",
      "journal-title": "Nature (London)"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB14",
      "doi-asserted-by": "crossref",
      "first-page": "602",
      "DOI": "10.1038/385602a0",
      "volume": "385",
      "author": "Sicheri",
      "year": "1997",
      "journal-title": "Nature (London)"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB15",
      "doi-asserted-by": "crossref",
      "first-page": "1818",
      "DOI": "10.1103/PhysRevLett.48.1818",
      "volume": "48",
      "author": "Hoover",
      "year": "1982",
      "journal-title": "Phys. Rev. Lett."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB16",
      "doi-asserted-by": "crossref",
      "first-page": "433",
      "DOI": "10.1016/0375-9601(83)90256-6",
      "volume": "98",
      "author": "Evans",
      "year": "1983",
      "journal-title": "Phys. Lett. A"
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB17",
      "doi-asserted-by": "crossref",
      "first-page": "243",
      "DOI": "10.1016/0097-8485(92)80010-W",
      "volume": "16",
      "author": "Morikami",
      "year": "1992",
      "journal-title": "Comput. Chem."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB18",
      "doi-asserted-by": "crossref",
      "first-page": "230",
      "DOI": "10.1002/jcc.540070216",
      "volume": "7",
      "author": "Weiner",
      "year": "1986",
      "journal-title": "J. Comput. Chem."
    },
    {
      "key": "10.1016/S0009-2614(97)01074-9_BIB19",
      "doi-asserted-by": "crossref",
      "first-page": "375",
      "DOI": "10.1038/372375a0",
      "volume": "372",
      "author": "Lim",
      "year": "1994",
      "journal-title": "Nature (London)"
    }
  ],
  "container-title": "Chemical Physics Letters",
  "original-title": [],
  "language": "en",
  "link": [
    {
      "URL": "https://api.elsevier.com/content/article/PII:S0009261497010749?httpAccept=text/xml",
      "content-type": "text/xml",
      "content-version": "vor",
      "intended-application": "text-mining"
    },
    {
      "URL": "https://api.elsevier.com/content/article/PII:S0009261497010749?httpAccept=text/plain",
      "content-type": "text/plain",
      "content-version": "vor",
      "intended-application": "text-mining"
    }
  ],
  "deposited": {
    "date-parts": [
      [
        2019,
        4,
        15
      ]
    ],
    "date-time": "2019-04-15T09:28:00Z",
    "timestamp": 1555320480000
  },
  "score": 1,
  "resource": {
    "primary": {
      "URL": "https://linkinghub.elsevier.com/retrieve/pii/S0009261497010749"
    }
  },
  "subtitle": [],
  "short-title": [],
  "issued": {
    "date-parts": [
      [
        1997,
        10
      ]
    ]
  },
  "references-count": 19,
  "journal-issue": {
    "issue": "4-6",
    "published-print": {
      "date-parts": [
        [
          1997,
          10
        ]
      ]
    }
  },
  "alternative-id": [
    "S0009261497010749"
  ],
  "URL": "http://dx.doi.org/10.1016/S0009-2614(97)01074-9",
  "relation": {},
  "ISSN": [
    "0009-2614"
  ],
  "subject": [],
  "container-title-short": "Chemical Physics Letters",
  "published": {
    "date-parts": [
      [
        1997,
        10
      ]
    ]
  }
}