Crossref
journal-article
Elsevier BV
Biochimica et Biophysica Acta (BBA) - Bioenergetics (78)
References
43
Referenced
91
10.1016/S0959-440X(98)80127-9
/ Curr. Opin. Struct. Biol. by Wikström (1998)10.1016/S0005-2728(00)00068-2
/ Biophys. Biochim. Acta by Wikström (2000)10.1021/bi9910934
/ Biochemistry by Michel (1999)10.1016/S0005-2728(98)00075-9
/ Biophys. Biochim. Acta by Gennis (1998)10.1016/S0005-2728(00)00066-9
/ Biochim. Biophys. Acta by Zaslavsky (2000){'key': '10.1016/S0005-2728(03)00002-1_BIB6', 'first-page': '1', 'volume': '118', 'author': 'Stuchebrukhov', 'year': '2001', 'journal-title': 'Adv. Chem. Phys.'}
/ Adv. Chem. Phys. by Stuchebrukhov (2001)10.1038/46972
/ Nature by Page (1999)10.1038/355796a0
/ Nature by Moser (1992)10.1126/science.7792598
/ Science by Langen (1995)10.1146/annurev.bi.65.070196.002541
/ Ann. Rev. Biochem. by Gray (1996){'key': '10.1016/S0005-2728(03)00002-1_BIB11', 'author': 'Stuchebrukhov', 'year': '2003', 'journal-title': 'J. Theor. Comp. Chem.'}
/ J. Theor. Comp. Chem. by Stuchebrukhov (2003)10.1002/ijch.199900054
/ Isr. J. Chem. by Agmon (1999)10.1051/jcp/1996931714
/ J. Chim. Phys. (Paris) by Agmon (1996)10.1016/0009-2614(95)00905-J
/ Chem. Phys. Lett. by Agmon (1995)10.1073/pnas.75.1.298
/ Proc. Nat. Acad. Sci. U. S. A. by Nagle (1978)10.1002/ijch.199900044
/ Isr. J. Chem. by Pomes (1999)- S. Yoshikawa, private communication.
10.1002/(SICI)1097-0134(199801)30:1<100::AID-PROT9>3.0.CO;2-S
/ Proteins by Hofacker (1998)10.1016/S0014-5793(97)01003-X
/ FEBS Lett. by Riistama (1997)10.1016/S0005-2728(98)00077-2
/ Biophys. Biochim. Acta by Pomes (1998)10.1021/ja0000706
/ J. Am. Chem. Soc. by Medvedev (2000)10.1126/science.280.5370.1723
/ Science by Yoshikawa (1998)10.1021/ja00124a002
/ J. Am. Chem. Soc. by Cornell (1995)10.1016/S0006-3495(98)73996-7
/ Biophys. J. by Kannt (1998)- D. Popovic, A.A. Stuchebrukhov, Electrostatic calculations of cytochrome oxidase, in preparation.
10.1002/(SICI)1097-0134(199604)24:4<433::AID-PROT3>3.0.CO;2-F
/ Proteins: Struct., Funct. Genet. by Zhang (1996)- NBS tables for chemical thermodynamic properties, 1982.
- (a) J. Hermans, private communication.
10.1021/jm00145a002
/ J. Med. Chem. by Goodford (1985){'key': '10.1016/S0005-2728(03)00002-1_BIB25_3', 'first-page': '147', 'volume': '36', 'author': 'Wade', 'year': '1993', 'journal-title': 'J. Med. Chem.'}
/ J. Med. Chem. by Wade (1993)10.1063/1.445869
/ J. Chem. Phys. by Jorgensen (1983)10.1002/jcc.540040211
/ J. Comp. Chem. by Brooks (1983){'key': '10.1016/S0005-2728(03)00002-1_BIB28', 'series-title': 'ZINDO', 'author': 'Zerner', 'year': '2002'}
/ ZINDO by Zerner (2002)- The charges, molecular coordinates, and some other details of the calculation are available in the supplementary material to this paper.
- The energy evaluations within the protein are done with no dielectric screening of the Coulomb interactions of the partial charges, as no such screening is applied in the bulk state calculations. It is usually assumed that the partial charges are already rescaled to reflect the electronic polarizability of the medium. There is a well-known uncertainly of the Coulomb energy evaluation here, which in some cases may result in an additional factor of 1/1.4 to 1/2.
10.1073/pnas.96.1.35
/ Proc. Natl. Acad. Sci. U. S. A. by Puustinen (1999){'key': '10.1016/S0005-2728(03)00002-1_BIB32', 'first-page': '1391', 'volume': '82', 'author': 'Schmidt', 'year': '2002', 'journal-title': 'Biophys. J.'}
/ Biophys. J. by Schmidt (2002)10.1016/0005-2728(96)00040-0
/ Biophys. Biochim. Acta by Riistama (1996){'key': '10.1016/S0005-2728(03)00002-1_BIB34', 'series-title': 'Water Movement Through Lipid Bilayers', 'author': 'Finkelstein', 'year': '1987'}
/ Water Movement Through Lipid Bilayers by Finkelstein (1987)- Joel Morgan, private communication.
- H. Michel, EBEC2002 Lecture, Sept. 2002.
- Results shown in Fig. 4 have been reported at Biophys. Soc. Meeting, San Francisco, Feb. 2002, and at EBEC2002, Sep. 2002, BBA Short Reports 12 (2002) 107.
10.1016/S0005-2728(01)00220-1
/ Biochim. Biophys. Acta by Verkhovsky (2001)
Dates
Type | When |
---|---|
Created | 22 years, 5 months ago (March 4, 2003, 9:05 a.m.) |
Deposited | 6 years, 5 months ago (March 29, 2019, 11:28 p.m.) |
Indexed | 1 year, 1 month ago (July 25, 2024, 3:57 a.m.) |
Issued | 22 years, 6 months ago (March 1, 2003) |
Published | 22 years, 6 months ago (March 1, 2003) |
Published Print | 22 years, 6 months ago (March 1, 2003) |
@article{Zheng_2003, title={Computer simulation of water in cytochrome c oxidase}, volume={1557}, ISSN={0005-2728}, url={http://dx.doi.org/10.1016/s0005-2728(03)00002-1}, DOI={10.1016/s0005-2728(03)00002-1}, journal={Biochimica et Biophysica Acta (BBA) - Bioenergetics}, publisher={Elsevier BV}, author={Zheng, Xuehe and Medvedev, Dmitry M and Swanson, Jessica and Stuchebrukhov, Alexei A}, year={2003}, month=mar, pages={99–107} }