DOI: 10.1016/0092-8674(87)90503-4. The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library

The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library

10.1016/0092-8674(87)90503-4

Crossref journal-article

Elsevier BV

Cell (78)

Bibliography

Kohara, Y., Akiyama, K., & Isono, K. (1987). The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library. Cell, 50(3), 495â508.

Authors 3

Yuji Kohara (first)
Kiyotaka Akiyama (additional)
Katsumi Isono (additional)

References 34 Referenced 1,385

10.1002/j.1460-2075.1985.tb03961.x / EMBO J. / Mapping muscle protein genes by in situ hybridization using biotin-labeled probes by Albertson (1985)
10.1128/mr.47.2.180-230.1983 / Microbiol. Rev. / Linkage map of Escherichia coli K-12, edition 7 by Bachmann (1983)
10.1016/S0022-2836(83)80320-9 / J. Mol. Biol. / Chromosomal walking and jumping to isolate DNA from the Ace and rosy loci and the bithorax complex in Drosophila melanogaster by Bender (1983)
10.1093/nar/6.5.1817 / Nucl. Acids Res. / Physical map of the seven ribosomal RNA genes of Escherichia coli by Boros (1979)
10.1093/nar/6.8.2961 / Nucl. Acids Res. / Physical map of the seven ribosomal RNA genes of Escherichia coli by Boros (1979)
10.1016/0022-2836(82)90413-2 / J. Mol. Biol. / Physical map of a 470 × 103 base-pair region flanking the terminus of DNA replication in the Escherichia coli K-12 genome by Bouché (1982)
10.1126/science.3952500 / Science / Electrophoretic separation of large DNA molecules by periodic inversion of the electric field by Carle (1986)
{'key': '10.1016/0092-8674(87)90503-4_BIB7', 'first-page': '1991', 'article-title': 'Genomic sequencing', 'volume': '81', 'author': 'Church', 'year': '1984'} / Genomic sequencing by Church (1984)
10.1016/0092-8674(76)90055-6 / Cell / A colony bank containing synthetic ColE1 hybrid plasmids representative of the entire E. coli genome by Clarke (1976)
{'key': '10.1016/0092-8674(87)90503-4_BIB9', 'first-page': '6812', 'article-title': 'Directional cloning of DNA fragments at a large distance from an initial probe: a circularization method', 'volume': '81', 'author': 'Collins', 'year': '1984'} / Directional cloning of DNA fragments at a large distance from an initial probe: a circularization method by Collins (1984)
{'key': '10.1016/0092-8674(87)90503-4_BIB10', 'first-page': '7821', 'article-title': 'Toward a physical map of the genome of the nematode Caenorhabditis elegans', 'volume': '83', 'author': 'Coulson', 'year': '1986'} / Toward a physical map of the genome of the nematode Caenorhabditis elegans by Coulson (1986)
10.1038/325831a0 / Nature / Mapping using gene encyclopaedias by Daniels (1987)
10.1016/0092-8674(79)90308-8 / Cell / DNA sequences of promoter regions for rRNA operons rmE and rmA in E. coli by de Boer (1979)
10.1016/0168-9525(86)90245-3 / Trends Genet. / Cross-sections of the GenBank database by Foley (1986)
10.1016/0003-2697(84)90381-6 / Anal. Biochem. / A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity (addendum) by Feinberg (1984)
10.1016/S0022-2836(83)80190-9 / J. Mol. Biol. / Lambda replacement vectors carrying polylinker sequences by Frischauf (1983)
{'key': '10.1016/0092-8674(87)90503-4_BIB16', 'first-page': '7069', 'article-title': 'Inversion between ribosomal RNA genes of Escherichia coli', 'volume': '78', 'author': 'Hill', 'year': '1981'} / Inversion between ribosomal RNA genes of Escherichia coli by Hill (1981)
10.1093/nar/12.1Part1.101 / Nucl. Acids Res. / A computer program package for storing and retrieving DNARNA and protein sequence data by Isono (1984)
10.1016/0378-1119(84)90049-0 / Gene / A new selective phage cloning vector, lambda 2001, with sites for Xbal, BamHI, Hindlll, EcoRI, Sstl, and Xhol by Karn (1984)
10.1016/S0021-9258(17)44354-7 / J. Biol. Chem. / The DNA sequences encoding plsB and dgk loci of Escherichia coli by Lightner (1983)
{'key': '10.1016/0092-8674(87)90503-4_BIB20', 'first-page': '587', 'article-title': 'Bacteriophage lambda; abortive infection of bacteria lysogenic for phage P2', 'volume': '66', 'author': 'Lindahl', 'year': '1970'} / Bacteriophage lambda; abortive infection of bacteria lysogenic for phage P2 by Lindahl (1970)
{'key': '10.1016/0092-8674(87)90503-4_BIB21', 'author': 'Maniatis', 'year': '1982'} by Maniatis (1982)
{'key': '10.1016/0092-8674(87)90503-4_BIB22', 'series-title': 'Nucleic Acid Hybridization: A Practical Approach', 'first-page': '113', 'article-title': 'Hybridization in the analysis of recombinant DNA', 'author': 'Mason', 'year': '1985'} / Nucleic Acid Hybridization: A Practical Approach / Hybridization in the analysis of recombinant DNA by Mason (1985)
{'key': '10.1016/0092-8674(87)90503-4_BIB23', 'first-page': '5099', 'article-title': 'Bacteriophage lambda carrying the Escherichia coli chromosomal region of the replication origin', 'volume': '75', 'author': 'Miki', 'year': '1978'} / Bacteriophage lambda carrying the Escherichia coli chromosomal region of the replication origin by Miki (1978)
10.1016/0092-8674(79)90224-1 / Cell / DNA'sequence of the gene for the outer membrane lipoprotein of E. coli: an extremely AT-rich promoter by Nakamura (1979)
10.1128/jb.138.3.715-720.1979 / J. Bacteriol. / Restriction enzyme cleavage sites surrounding the structural gene for the lipoprotein of the Escherichia coli outer membrane by Nakamura (1979)
10.1128/mr.47.2.231-284.1983 / Microbiol. Rev. / Gene-protein index of Escherichia coli K-12 by Neidhardt (1983)
10.1146/annurev.bi.53.070184.000451 / Ann. Rev. Biochem. / Regulation of the synthesis of ribosomes and ribosomal components by Nomura (1984)
{'key': '10.1016/0092-8674(87)90503-4_BIB28', 'first-page': '7826', 'article-title': 'Random-clone strategy for genomic restriction mapping in yeast', 'volume': '83', 'author': 'Olson', 'year': '1986'} / Random-clone strategy for genomic restriction mapping in yeast by Olson (1986)
10.1016/0378-1119(84)90120-3 / Gene / Rapid restriction mapping of DNA cloned in phage vectors by Rackwitz (1984)
10.1016/0092-8674(84)90301-5 / Cell / Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis by Schwartz (1984)
{'key': '10.1016/0092-8674(87)90503-4_BIB31', 'first-page': '575', 'article-title': 'Nucleotide sequence of Escherichia coli K-12 replication origin', 'volume': '76', 'author': 'Sugimoto', 'year': '1979'} / Nucleotide sequence of Escherichia coli K-12 replication origin by Sugimoto (1979)
10.1093/nar/8.16.3673 / Nucl. Acids Res. / A new method for storage and manipulation of DNA gel reading data by Staden (1979)
10.1128/jb.163.3.1074-1079.1985 / J. Bacteriol. / Isolation and expression of the Escherichia coli gene encoding malate dehydrogenase by Sutherland (1985)

Dates

Type	When
Created	21 years, 3 months ago (May 4, 2004, 6:14 a.m.)
Deposited	3 years, 2 months ago (June 21, 2022, 8:30 p.m.)
Indexed	2 weeks, 4 days ago (Aug. 5, 2025, 9 a.m.)
Issued	38 years, 1 month ago (July 1, 1987)
Published	38 years, 1 month ago (July 1, 1987)
Published Print	38 years, 1 month ago (July 1, 1987)

Funders 0

None

BibTeX

@article{Kohara_1987, title={The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic library}, volume={50}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/0092-8674(87)90503-4}, DOI={10.1016/0092-8674(87)90503-4}, number={3}, journal={Cell}, publisher={Elsevier BV}, author={Kohara, Yuji and Akiyama, Kiyotaka and Isono, Katsumi}, year={1987}, month=jul, pages={495–508} }

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