DOI: 10.1007/s00253-009-2085-6. Engineering the isobutanol biosynthetic pathway in Escherichia coli by comparison of three aldehyde reductase/alcohol dehydrogenase genes

Engineering the isobutanol biosynthetic pathway in Escherichia coli by comparison of three aldehyde reductase/alcohol dehydrogenase genes

10.1007/s00253-009-2085-6

Crossref journal-article

Springer Science and Business Media LLC

Applied Microbiology and Biotechnology (297)

Bibliography

Atsumi, S., Wu, T.-Y., Eckl, E.-M., Hawkins, S. D., Buelter, T., & Liao, J. C. (2009). Engineering the isobutanol biosynthetic pathway in Escherichia coli by comparison of three aldehyde reductase/alcohol dehydrogenase genes. Applied Microbiology and Biotechnology, 85(3), 651â657.

Authors 6

Shota Atsumi (first)
Tung-Yun Wu (additional)
Eva-Maria Eckl (additional)
Sarah D. Hawkins (additional)
Thomas Buelter (additional)
James C. Liao (additional)

References 20 Referenced 266

Atsumi S, Cann AF, Connor MR, Shen CR, Smith KM, Brynildsen MP, Chou KJ, Hanai T, Liao JC (2008a) Metabolic engineering of Escherichia coli for 1-butanol production. Metab Eng 10(6):305–311 (10.1016/j.ymben.2007.08.003) / Metab Eng by S Atsumi (2008)
Atsumi S, Hanai T, Liao JC (2008b) Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 451(7174):86–89 (10.1038/nature06450) / Nature by S Atsumi (2008)
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2:E1–E11 (10.1038/msb4100050) / Mol Syst Biol by T Baba (2006)
Baneyx F, Mujacic M (2004) Recombinant protein folding and misfolding in Escherichia coli. Nat Biotechnol 22(11):1399–1408 (10.1038/nbt1029) / Nat Biotechnol by F Baneyx (2004)
Bolotin A, Wincker P, Mauger S, Jaillon O, Malarme K, Weissenbach J, Ehrlich SD, Sorokin A (2001) The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403. Genome Res 11(5):731–753 (10.1101/gr.GR-1697R) / Genome Res by A Bolotin (2001)
Cann AF, Liao JC (2008) Production of 2-methyl-1-butanol in engineered Escherichia coli. Appl Microbiol Biotechnol 81(1):89–98 (10.1007/s00253-008-1631-y) / Appl Microbiol Biotechnol by AF Cann (2008)
Connor MR, Liao JC (2008) Engineering of an Escherichia coli strain for the production of 3-methyl-1-butanol. Appl Environ Microbiol 74(18):5769–5775 (10.1128/AEM.00468-08) / Appl Environ Microbiol by MR Connor (2008)
Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97(12):6640–6645 (10.1073/pnas.120163297) / Proc Natl Acad Sci U S A by KA Datsenko (2000)
de la Plaza M, Fernandez de Palencia P, Pelaez C, Requena T (2004) Biochemical and molecular characterization of alpha-ketoisovalerate decarboxylase, an enzyme involved in the formation of aldehydes from amino acids by Lactococcus lactis. FEMS Microbiol Lett 238(2):367–374 / FEMS Microbiol Lett by M Plaza de la (2004)
Fisher AC, Kim W, DeLisa MP (2006) Genetic selection for protein solubility enabled by the folding quality control feature of the twin-arginine translocation pathway. Protein Sci 15(3):449–458 (10.1110/ps.051902606) / Protein Sci by AC Fisher (2006)
Fowler SB, Poon S, Muff R, Chiti F, Dobson CM, Zurdo J (2005) Rational design of aggregation-resistant bioactive peptides: reengineering human calcitonin. Proc Natl Acad Sci U S A 102(29):10105–10110 (10.1073/pnas.0501215102) / Proc Natl Acad Sci U S A by SB Fowler (2005)
Inui M, Suda M, Kimura S, Yasuda K, Suzuki H, Toda H, Yamamoto S, Okino S, Suzuki N, Yukawa H (2008) Expression of Clostridium acetobutylicum butanol synthetic genes in Escherichia coli. Appl Microbiol Biotechnol 77(6):1305–1316 (10.1007/s00253-007-1257-5) / Appl Microbiol Biotechnol by M Inui (2008)
Jornvall H, Persson B, Jeffery J (1987) Characteristics of alcohol/polyol dehydrogenases. The zinc-containing long-chain alcohol dehydrogenases. Eur J Biochem 167(2):195–201 (10.1111/j.1432-1033.1987.tb13323.x) / Eur J Biochem by H Jornvall (1987)
Lutz R, Bujard H (1997) Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements. Nucleic Acids Res 25(6):1203–1210 (10.1093/nar/25.6.1203) / Nucleic Acids Res by R Lutz (1997)
Perez JM, Arenas FA, Pradenas GA, Sandoval JM, Vasquez CC (2008) Escherichia coli YqhD exhibits aldehyde reductase activity and protects from the harmful effect of lipid peroxidation-derived aldehydes. J Biol Chem 283(12):7346–7353 (10.1074/jbc.M708846200) / J Biol Chem by JM Perez (2008)
Schwarzenbacher R, von Delft F, Canaves JM, Brinen LS, Dai X, Deacon AM, Elsliger MA, Eshaghi S, Floyd R, Godzik A et al (2004) Crystal structure of an iron-containing 1,3-propanediol dehydrogenase (TM0920) from Thermotoga maritima at 1.3 A resolution. Proteins 54(1):174–177 (10.1002/prot.10594) / Proteins by R Schwarzenbacher (2004)
Scrutton NS, Berry A, Perham RN (1990) Redesign of the coenzyme specificity of a dehydrogenase by protein engineering. Nature 343(6253):38–43 (10.1038/343038a0) / Nature by NS Scrutton (1990)
Shen CR, Liao JC (2008) Metabolic engineering of Escherichia coli for 1-butanol and 1-propanol production via the keto-acid pathways. Metab Eng 10(6):312–320 (10.1016/j.ymben.2008.08.001) / Metab Eng by CR Shen (2008)
Sulzenbacher G, Alvarez K, Van Den Heuvel RH, Versluis C, Spinelli S, Campanacci V, Valencia C, Cambillau C, Eklund H, Tegoni M (2004) Crystal structure of E. coli alcohol dehydrogenase YqhD: evidence of a covalently modified NADP coenzyme. J Mol Biol 342(2):489–502 (10.1016/j.jmb.2004.07.034) / J Mol Biol by G Sulzenbacher (2004)
Valencia E, Larroy C, Ochoa WF, Pares X, Fita I, Biosca JA (2004) Apo and Holo structures of an NADPH-dependent cinnamyl alcohol dehydrogenase from Saccharomyces cerevisiae. J Mol Biol 341(4):1049–1062 (10.1016/j.jmb.2004.06.037) / J Mol Biol by E Valencia (2004)

Dates

Type	When
Created	16 years, 1 month ago (July 15, 2009, 7:05 a.m.)
Deposited	6 years, 4 months ago (April 7, 2019, 3:31 a.m.)
Indexed	1 month, 2 weeks ago (July 16, 2025, 8:24 a.m.)
Issued	16 years, 1 month ago (July 16, 2009)
Published	16 years, 1 month ago (July 16, 2009)
Published Online	16 years, 1 month ago (July 16, 2009)
Published Print	15 years, 8 months ago (Jan. 1, 2010)

Funders 0

None

BibTeX

@article{Atsumi_2009, title={Engineering the isobutanol biosynthetic pathway in Escherichia coli by comparison of three aldehyde reductase/alcohol dehydrogenase genes}, volume={85}, ISSN={1432-0614}, url={http://dx.doi.org/10.1007/s00253-009-2085-6}, DOI={10.1007/s00253-009-2085-6}, number={3}, journal={Applied Microbiology and Biotechnology}, publisher={Springer Science and Business Media LLC}, author={Atsumi, Shota and Wu, Tung-Yun and Eckl, Eva-Maria and Hawkins, Sarah D. and Buelter, Thomas and Liao, James C.}, year={2009}, month=jul, pages={651–657} }

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