Bibliography
Stackebrandt, E., Fischer, A., Roggentin, T., Wehmeyer, U., Bomar, D., & Smida, J. (1988). A phylogenetic survey of budding, and/or prosthecate, non-phototrophic eubacteria: membership of Hyphomicrobium, Hyphomonas, Pedomicrobium, Filomicrobium, Caulobacter andâ¯?Dichotomicrobium? to the alpha-subdivision of purple non-sulfur bacteria. Archives of Microbiology, 149(6), 547â556.
References
58
Referenced
41
-
Albrecht W, Fischer A, Smida J, Stackebrandt E (1987) Verrucomicrobium spinosum, a eubacterium representing an ancient line of descent. System Appl Microbiol 10:57?62
(
10.1016/S0723-2020(87)80011-5
) / System Appl Microbiol by W Albrecht (1987) -
Bomar D, Stackebrandt E (1987) 5S rRNA sequences from Nitrobacter winogradskyi, Caulobacter crescentus, Stella humosa and Verrucomicrobium spinosum. Nucl Acids Res 15:9597
(
10.1093/nar/15.22.9597
) / Nucl Acids Res by D Bomar (1987) -
Bomar D, Giovannoni S, Stackebrandt E (1987) A new type of eubacterial 5S rRNA in members of the order Planctomycetales. J Mol Evol (in press)
(
10.1007/BF02138371
) -
Brosius J, Palmer JL, Kennedy JP, Noller HF (1978) Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Nat Acad Sci (USA) 75:4801?4805
(
10.1073/pnas.75.10.4801
) / Proc Nat Acad Sci (USA) by J Brosius (1978) - Buchanan RE, Gibbons NE (1974) Budding and/or appendaged bacteria. In: Buchanan RE, Gibbons NE (eds) Bergey's manual of determinative bacteriology, 8th edn. Williams and Wilkins, Baltimore, p 148 / Bergey's manual of determinative bacteriology by RE Buchanan (1974)
-
Chen EG, Seeburg PH (1985) Supercoil sequencing: a fast and simple method for sequencing plasmid DNA DNA 4:165?170
(
10.1089/dna.1985.4.165
) / DNA by EG Chen (1985) - Corder RE, Magruder GC, Clausen EC, Gaddy JL (1987) Isolation and characterization of a prosthecate methylotroph. Abstract I-138 of the 87th ASM Meeting, 1?6 March, Atlanta, USA
- De Wachter R, Huysmans E, Vandenberghe A (1985) 5S ribosomal RNA as a tool for studying evolution. In: Schleifer KH, Stackebrandt E (eds) Evolution of prokaryotes. Academic Press. London, pp 115?141 / Evolution of prokaryotes by R Wachter De (1985)
-
Donis-Keller H, Maxam AM, Gilbert W (1977) Mapping adenines, guanines and pyrimidines in RNA. Nucl Acids Res 4:2527?2538
(
10.1093/nar/4.8.2527
) / Nucl Acids Res by H Donis-Keller (1977) -
Eckhardt FEW, Roggentin P, Hirsch P (1979) Fatty acid composition of various hyphal budding bacteria. Arch Microbiol 120:81?85
(
10.1007/BF00409092
) / Arch Microbiol by FEW Eckhardt (1979) -
Embley M, Smida J, Stackebrandt E (1988) Reverse transcriptase sequencing of 16S rRNA from Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta. J Gen Microbiol (in press)
(
10.1099/00221287-134-4-961
) -
Erdmann VA, Wolters J (1986) Collection of published 5S, 5.8S and 4.5S ribosomal RNA sequences. Nucl Acids Res 14:1?59 Suppl
(
10.1093/nar/14.suppl.r1
) / Nucl Acids Res by VA Erdmann (1986) -
Fischer A, Roggentin T, Schlesner H, Stackebrandt E (1985) 16S ribosomal RNA oligonucleotide cataloguing and the phylogenetic position of Stella humosa. System Appl Microbiol 6:43?47
(
10.1016/S0723-2020(85)80009-6
) / System Appl Microbiol by A Fischer (1985) -
Fitch WM, Margoliash E (1967) Construction of phylogenetic trees: a method based on mutation distances as estimated from cytochrome C sequences is of general applicability. Science 155:279?284
(
10.1126/science.155.3760.279
) / Science by WM Fitch (1967) -
Fowler VJ, Pfennig N, Schubert W, Stackebrandt E (1984) Towards a phylogeny of phototrophic purple sulfur bacteria-16S rRNA oligonucleotide cataloguing of 11 species of Chromatiaceae. Arch Microbiol 139:382?387
(
10.1007/BF00408384
) / Arch Microbiol by VJ Fowler (1984) - Fox GE, Stackebrandt E (1987) The application of 16S rRNA cataloguing and 5S rRNA sequencing in bacterial systematics. In: Colwell R, Grigorova R (eds) Methods in microbiology, vol 19. Academic Press, Orlando, pp 405?458 / Methods in microbiology, vol 19 by GE Fox (1987)
-
Fox GE, Pechman KJ, Woese CR (1977) Comparative cataloging of 16S ribosomal ribonucleic acid: a molecular approach to prokaryotic systematics. Int J System Bacteriol 27:44?57
(
10.1099/00207713-27-1-44
) / Int J System Bacteriol by GE Fox (1977) -
Gebers R (1981) Enrichment, isolation, and emended description of Pedomicrobium ferrungineum Aristovskaya and Pedomicrobium manganicum Aristovskaya. Int J System Bacteriol 31:302?316
(
10.1099/00207713-31-3-302
) / Int J System Bacteriol by R Gebers (1981) -
Gebers R, Wehmeyer U, Roggentin T, Schlesner H, Kölbel-Boelke J, Hirsch P (1985) Deoxyribonucleic acid base compositions and nucleotide distribution of 65 strains of budding bacteria. Int J Syst Bacteriol 35:260?269
(
10.1099/00207713-35-3-260
) / Int J Syst Bacteriol by R Gebers (1985) -
Gebers R, Martens B, Wehmeyer U, Hirsch P (1986) Deoxyribonucleic acid homologies of Hyphomicrobium spp., Hyphomonas ssp., and other hyphal, budding bacteria. Int J Syst Bacteriol 36:241?245
(
10.1099/00207713-36-2-241
) / Int J Syst Bacteriol by R Gebers (1986) -
Gibbons NE, Murray RGE (1978) Proposals concerning the higher taxa of bacteria. Int J Syst Bacteriol 28:1?6
(
10.1099/00207713-28-1-1
) / Int J Syst Bacteriol by NE Gibbons (1978) -
Gibson J, Stackebrandt E, Zablen LB, Gupta C, Woese CR (1979) A phylogenetic analyses of the purple photosynthetic bacteria. Curr Microbiol 3:59?64
(
10.1007/BF02603136
) / Curr Microbiol by J Gibson (1979) -
Giovannoni SJ, Schabtach E, Castenholz RW (1987) Isophaera pallida, gen, and comb. nov., a gliding, budding eubacterium from hot springs. Arch Microbiol 147:276?284
(
10.1007/BF00463488
) / Arch Microbiol by SJ Giovannoni (1987) -
Hennecke H, Kaluza K, Thony B, Fuhrmann N, Ludwig W, Stackebrandt E (1985) Concurrent evolution of nitrogenase genes and 16S rRNA in Rhizobium species and other nitrogen fixing bacteria. Arch Microbiol 142:342?348
(
10.1007/BF00491901
) / Arch Microbiol by H Hennecke (1985) -
Henrici AT, Johnson DE (1935) Studies of freshwater bacteria. II. Stalked bacteria, a new order of Schizomyces. J Bacteriol 30:61?93
(
10.1128/JB.30.1.61-93.1935
) / J Bacteriol by AT Henrici (1935) -
Hirsch P (1974) Budding bacteria. Ann Rev Microbiol 28:391?444
(
10.1146/annurev.mi.28.100174.002135
) / Ann Rev Microbiol by P Hirsch (1974) - Hirsch P (1980) Distribution and pure culture studies of morphologically distinct solar lake microorganisms. In: Nissenbaum A (ed) Hypersaline brines and evaporitic environments. Elsevier/ North-Holland Sci Publ Co, Amsterdam, pp 41?60 / Hypersaline brines and evaporitic environments by P Hirsch (1980)
-
Hirsch P, Conti SF (1964) Biology of budding bacteria II. Growth and nutrition of Hyphomicrobium spp. Arch Mikrobiol 48:358?367
(
10.1007/BF00405979
) / Arch Mikrobiol by P Hirsch (1964) - Hirsch P, Müller M, Schlesner H (1977) New aquatic budding and prosthecate bacteria and their taxonomic position. Soc Appl Bacteriol Symp 6:107?133 / Soc Appl Bacteriol Symp by P Hirsch (1977)
-
Hori H (1975) Evolution of 5S RNA. J Mol Evol 7:75?88
(
10.1007/BF01732181
) / J Mol Evol by H Hori (1975) -
Hori H, Osawa S (1986) Evolution change in 5S rRNA secondary structure and a phylogenetic tree of 352 5S rRNA species. Bio Systems 19:163?172
(
10.1016/0303-2647(86)90037-7
) / Bio Systems by H Hori (1986) - Johnson JL (1981) Genetic characterization. In: Gerhardt P, Murray RGE, Costilow RN, Nester EW, Wood WA, Krieg NR, Briggs Phillips G (eds) Manual of methods for general bacteriology, Americ Soc Microbiol Washington, pp 450?475 / Manual of methods for general bacteriology by JL Johnson (1981)
- Kirby KS (1968) Isolation of nucleic acids with phenolic solvents. In: Grossmann L, Moldave K (eds) Methods in enzymology, vol XIIB. Academic Press. New York London, pp 87?99 / Methods in enzymology, vol XIIB by KS Kirby (1968)
- Krupp G, Gross HJ (1983) Sequence analysis of in vitro 32P-labeled RNA. In: Agris PF, Kopper RA (eds) The modified nucleotides of transfer RNA, II. Liss, New York, pp 11?58 / The modified nucleotides of transfer RNA, II by G Krupp (1983)
-
Lane O, Pace B, Olsen G, Stahl O, Sogin M, Pace N (1985a) Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc Nat Acad Sci 82:6955?6959
(
10.1073/pnas.82.20.6955
) / Proc Nat Acad Sci by O Lane (1985) -
Lane DJ, Stahl DA, Olsen GJ, Heller DJ, Pace NR (1985b) Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5S rRNA sequences. J Bacteriol 163:75?81
(
10.1128/JB.163.1.75-81.1985
) / J Bacteriol by DJ Lane (1985) -
Matzen N, Hirsch P (1982) Improved growth conditions for Hyphomicrobium sp B-522 and two additional strains. Arch Microbiol 131:32?35
(
10.1007/BF00451495
) / Arch Microbiol by N Matzen (1982) -
Moore RL (1977) Ribosomal ribonucleic acid cistron homologies among Hyphomicrobium and various other bacteria. Can J Microbiol 23:478?481
(
10.1139/m77-071
) / Can J Microbiol by RL Moore (1977) -
Oyaizu H, Woese CR (1985) Phylogenetic relationships among the sulfate respiring bacteria, myxobacteria and purple bacteria. System Appl Microbiol 6:257?263
(
10.1016/S0723-2020(85)80028-X
) / System Appl Microbiol by H Oyaizu (1985) - Pfennig N, Trüper HG (1974) The phototrophic bacteria. In: Buchanan RE, Gibbons NE (eds) Bergey's manual of determinative bacteriology. Williams & Wilkins, Baltimore, pp 24?75 / Bergey's manual of determinative bacteriology by N Pfennig (1974)
-
Qu LH, Michot B, Bachellerie GP (1983) Improved methods for structure probing in large RNAs: a rapid heterologous sequencing approach is coupled to the direct mapping of nuclease accessible sites. Application to the 5? terminal domain of eukaryotic 28s rRNA. Nucl Acids Res 11:5903?5920
(
10.1093/nar/11.17.5903
) / Nucl Acids Res by LH Qu (1983) -
Queen C, Korn LJ (1984) A comprehensive sequence analysis program for the IBM personal computer. Nucl Acids Res 12:581?599
(
10.1093/nar/12.1Part2.581
) / Nucl Acids Res by C Queen (1984) -
Rothe B, Fischer A, Hirsch P, Sitting M, Stackebrandt E (1987) The phylogenetic position of the budding bacteria Blastobacter aggregatus and Gemmobacter aquatilis gen. nov. sp. nov. Arch Mikrobiol 147:92?99
(
10.1007/BF00492911
) / Arch Mikrobiol by B Rothe (1987) -
Schlesner H (1987) Filomicrobium fusiforme gen. nov., sp. nov., a slender budding, hyphal bacterium from brackish water. System Appl Microbiol 9:(in press)
(
10.1016/S0723-2020(87)80012-7
) - Schmidt JM, Starr MP (1981) The Blastocaulis-Planctomyces group of budding and appendaged bacteria. In: Starr MP, Stolp H, Trüper HG, Balows A, Schlegel HG (eds) The prokaryotes, vol I. Springer, Berlin Heidelberg New York, pp 498?504 / The prokaryotes, vol I by JM Schmidt (1981)
-
Seewaldt E, Schleifer KH, Bock E, Stackebrandt E (1982) The close phylogenetic relationship of Nitrobacter and Rhodopseudomonas palustris. Arch Mikrobiol 131:287?290
(
10.1007/BF00405895
) / Arch Mikrobiol by E Seewaldt (1982) -
Stackebrandt E, Kroppenstedt R (1987) Union of the genera Actinoplanes Couch, Ampullariella Couch, and Amorphosporangium Couch in a redefined genus Actinoplanes. System Appl Microbiol 9:110?114
(
10.1016/S0723-2020(87)80063-2
) / System Appl Microbiol by E Stackebrandt (1987) - Stackebrandt E, Woese CR (1984) The phylogeny of prokaryotes. Microbiol Sci 1:117?122 / Microbiol Sci by E Stackebrandt (1984)
-
Stackebrandt E, Ludwig W, Schleifer KH, Gros HJ (1981) Rapid cataloguing of ribonuclease T1 resistant oligonucleotides from ribosomal RNAs for phylogenetic studies. J Mol Evol 17:227?236
(
10.1007/BF01732760
) / J Mol Evol by E Stackebrandt (1981) -
Stackebrandt E, Ludwig W, Fox GE (1985) 16S ribosomal RNA oligonucleotide cataloguing. In: Gottschalk G (ed) Methods in microbiology, vol 18. Academic Press, London New York, pp 75?107
(
10.1016/S0580-9517(08)70472-0
) / Methods in microbiology, vol 18 by E Stackebrandt (1985) - Stackebrandt E, Fischer A, Hirsch P, Roggentin T, Schlesner H (1986) The phylogeny of an ancient group of budding peptidoglycan-less eubacteria: the genera Planctomyces and Pirella. Endocyt C Res 3:29?40 / Endocyt C Res by E Stackebrandt (1986)
- Stackebrandt E, Ludwig W, Weizenegger M, Dorn S, McGill TJ, Fox GE, Woese CR, Schubert W, Schleifer KH (1987) Comparative 16S rRNA oligonucleotide analyses and murein types of round-spore-forming bacilli and non-spore-forming relatives. J Gen Microbiol 133:2523?2529 / J Gen Microbiol by E Stackebrandt (1987)
- Staley JT, Hirsch P, Schmidt JM (1981) Introduction to the budding and/or appendaged bacteria. In: Starr MP, Stolp H, Trüper HG, Balows A, Schlegel HG (eds) The prokaryotes, vol I. Springer, Berlin Heidelberg New York, pp 448?455 / The prokaryotes, vol I by JT Staley (1981)
-
Weisburg WG, Woese CR, Dobson ME, Weiss E (1985) A common origin of rickettsiae and certain plant pathogens. Sci 230:556?558
(
10.1126/science.3931222
) / Sci by WG Weisburg (1985) -
Woese CR (1987) Bacterial evolution. Microbiol Rev 51:221?271
(
10.1128/MMBR.51.2.221-271.1987
) / Microbiol Rev by CR Woese (1987) -
Woese CR, Stackebrandt E, Weisburg WG, Paster BJ, Madigan MT, Fowler VJ, Hahn CM, Blanz P, Gupta R, Nealson KH, Fox GE (1984) The phylogeny of purple bacteria: the alpha subdivision. System Appl Microbiol 5:315?326
(
10.1016/S0723-2020(84)80034-X
) / System Appl Microbiol by CR Woese (1984) -
Yang D, Oyaizu Y, Oyaizu H, Olsen GJ, Woese CR (1985) Mitochondrial origins. Proc Natl Acad Sci (USA) 82:4443?4447
(
10.1073/pnas.82.13.4443
) / Proc Natl Acad Sci (USA) by D Yang (1985) - Zavarzin GA (1961) Budding bacteria. Microbiology USSR 30:952?975 / Microbiology USSR by GA Zavarzin (1961)
Dates
Type | When |
---|---|
Created | 20 years, 9 months ago (Nov. 12, 2004, 8:10 p.m.) |
Deposited | 5 years, 4 months ago (April 3, 2020, 9:37 p.m.) |
Indexed | 3 months, 2 weeks ago (May 18, 2025, 10:45 a.m.) |
Issued | 37 years, 5 months ago (April 1, 1988) |
Published | 37 years, 5 months ago (April 1, 1988) |
Published Print | 37 years, 5 months ago (April 1, 1988) |
@article{Stackebrandt_1988, title={A phylogenetic survey of budding, and/or prosthecate, non-phototrophic eubacteria: membership of Hyphomicrobium, Hyphomonas, Pedomicrobium, Filomicrobium, Caulobacter and ?Dichotomicrobium? to the alpha-subdivision of purple non-sulfur bacteria}, volume={149}, ISSN={1432-072X}, url={http://dx.doi.org/10.1007/bf00446759}, DOI={10.1007/bf00446759}, number={6}, journal={Archives of Microbiology}, publisher={Springer Science and Business Media LLC}, author={Stackebrandt, Erko and Fischer, Angelika and Roggentin, Telse and Wehmeyer, Uta and Bomar, Daniel and Smida, Jan}, year={1988}, month=apr, pages={547–556} }