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Springer New York
Electron Tomography (297)
Bibliography

Mastronarde, D. N. (n.d.). Fiducial Marker and Hybrid Alignment Methods for Single- and Double-axis Tomography. Electron Tomography, 163–185.

Authors 1
  1. David N. Mastronarde (first)
References 20 Referenced 28
  1. Berriman, J., Bryan, R. K., Freeman, R. and Leonard, K. R. (1984). Methods for specimen thickness determination in electron microscopy. Ultramicroscopy 13:351–364. (10.1016/0304-3991(84)90001-9) / Ultramicroscopy by J. Berriman (1984)
  2. Brandt, S., Heikkonen, J. and Engelhardt, P. (2001a). Automatic alignment of transmission electron microscope tilt series without fiducial markers. J. Struct. Biol. 136:201–213. (10.1006/jsbi.2001.4443) / J. Struct. Biol. by S. Brandt (2001)
  3. Brandt, S., Heikkonen, J. and Engelhardt, P. (2001b). Multiphase method for automatic alignment of transmission electron microscope images using markers. J. Struct. Biol. 133:10–22. (10.1006/jsbi.2001.4343) / J. Struct. Biol. by S. Brandt (2001)
  4. Fung, J.C., Liu, W., de Ruijter, W. J., Chen, H., Abbey, C. K., Sedat, J.W. and Agard, D.A. (1996). Toward fully automated high-resolution electron tomography. J. Struct. Biol. 116: 181–189. (10.1006/jsbi.1996.0029) / J. Struct. Biol. by J.C. Fung (1996)
  5. Frank, J. and McEwen, B. F. (1992). Alignment by cross-correlation. In Electron Tomography (J. Frank, ed.). Plenum Press, New York, pp. 205–213. (10.1007/978-1-4757-2163-8_9) / Electron Tomography by J. Frank (1992)
  6. Gilbert, P. (1972). Iterative methods for the three-dimensional reconstruction of an object from projections. J. Theor. Biol. 36:105–117. (10.1016/0022-5193(72)90180-4) / J. Theor. Biol. by P. Gilbert (1972)
  7. Guckenberger, R. (1982). Determination of a common origin in the micrographs of tilt series in three-dimensional microscopy. Ultramicroscopy 9:167–174. (10.1016/0304-3991(82)90239-X) / Ultramicroscopy by R. Guckenberger (1982)
  8. Gordon, R. and Herman, G. T. (1971). Reconstruction of pictures from their projections. Commun. ACM 14:759–768. (10.1145/362919.362925) / Commun. ACM by R. Gordon (1971)
  9. Jing, Z. and Sachs, F. (1991). Alignment of tomographic projection using an incomplete set of fiducial markers. Ultramicroscopy 35:37–43. (10.1016/0304-3991(91)90042-5) / Ultramicroscopy by Z. Jing (1991)
  10. Koval, J. J. (1997). Variable metric function minimization. Appl. Stat. 46:515–540. / Appl. Stat. by J. J. Koval (1997)
  11. Kremer, J. R., Mastronarde, D. N. and McIntosh, J. R. (1996). Computer visualization of three-dimensional image data using IMOD. J. Struct. Biol. 116:71–76. (10.1006/jsbi.1996.0013) / J. Struct. Biol. by J. R. Kremer (1996)
  12. Lawrence, M.C. (1992). Least-squares method of alignment using markers. In Electron Tomography (J. Frank, ed.). Plenum Press, New York, pp. 197–204. (10.1007/978-1-4757-2163-8_8) / Electron Tomography by M.C. Lawrence (1992)
  13. Marsh, B. J., Mastronarde, D.N., Buttle, K. F., Howell, K. E. and McIntosh, J. R. (2001). Organellar relationships in the Golgi region of the pancreatic beta cell line, HIT-T15, visualized by high resolution electron tomography. Proc. Natl Acad. Sci. USA 98:2399–2406. (10.1073/pnas.051631998) / Proc. Natl Acad. Sci. USA by B. J. Marsh (2001)
  14. Mastronarde, D. N. (1997). Dual-axis tomography: an approach with alignment methods that preserve resolution. J. Struct. Biol. 120:343–352. (10.1006/jsbi.1997.3919) / J. Struct. Biol. by D. N. Mastronarde (1997)
  15. Owen, C. H. and Landis, W. J. (1996). Alignment of electron tomographic series by correlation without the use of gold particles. Ultramicroscopy 63:27–38. (10.1016/0304-3991(95)00154-9) / Ultramicroscopy by C. H. Owen (1996)
  16. Penczek, P., Marko, M., Buttle, K. and Frank, J. (1995). Double-tilt electron tomography. Ultramicroscopy 60:393–410. (10.1016/0304-3991(95)00078-X) / Ultramicroscopy by P. Penczek (1995)
  17. Radermacher, M. (1992). Weighted back-projection methods. In Electron Tomography (J. Frank, ed.). Plenum Press, New York, pp. 91–115. (10.1007/978-1-4757-2163-8_5) / Electron Tomography by M. Radermacher (1992)
  18. Ress, D., Harlow, M. L., Schwarz, M., Marshall, R. M. and McMahan, U. J. (1999). Automatic acquisition of fiducial markers and alignment of images in tilt series for electron tomography. J Electron Microsc. (Tokyo) 48:277–287. (10.1093/oxfordjournals.jmicro.a023679) / J Electron Microsc. (Tokyo) by D. Ress (1999)
  19. Taylor, K. A., Tang, J., Cheng, Y. and Winkler, H. (1997). The use of electron tomography for structural analysis of disordered protein arrays. J. Struct. Biol. 120:372–386. (10.1006/jsbi.1997.3932) / J. Struct. Biol. by K. A. Taylor (1997)
  20. Winkler, H. and Taylor, K.A. (2006). Accurate marker-free alignment with simultaneous geometry determination and reconstruction of tilt series in electron tomography. Ultramicroscopy 106:240–254. (10.1016/j.ultramic.2005.07.007) / Ultramicroscopy by H. Winkler (2006)
Dates
Type When
Created 17 years, 5 months ago (March 4, 2008, 1:44 p.m.)
Deposited 4 years, 3 months ago (April 29, 2021, 12:10 a.m.)
Indexed 2 weeks, 5 days ago (Aug. 5, 2025, 8:57 a.m.)
Funders 0

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@inbook{Mastronarde, title={Fiducial Marker and Hybrid Alignment Methods for Single- and Double-axis Tomography}, ISBN={9780387690087}, url={http://dx.doi.org/10.1007/978-0-387-69008-7_6}, DOI={10.1007/978-0-387-69008-7_6}, booktitle={Electron Tomography}, publisher={Springer New York}, author={Mastronarde, David N.}, pages={163–185} }