Crossref
journal-article
Elsevier BV
Journal of Theoretical Biology (78)
References
39
Referenced
132
10.1038/89204
/ Nature Biotechnol. / Complex biology with no parameters by BAILEY (2001)10.1016/S0167-7799(97)01067-6
/ Trends Biotechnol. / Flux analysis of underdetermined metabolic networks: the quest for the missing constraints by BONARIUS (1997)10.1016/S0968-0004(00)01754-0
/ Trends Biochem. Sci. / Metabolic Modeling of Microbial Strains in silico by COVERT (2001)-
COVERT, M. W. SCHILLING, C. H. PALSSON, B. O. 2001b, Regulation of gene expression in flux balance models of metabolism, J. theor. Biol. 213, 73, 88
(
10.1006/jtbi.2001.2405
) 10.1074/jbc.274.25.17410
/ J. Biol. Chem. / Properties of the Haemophilus influenzae Rd metabolic genotype by EDWARDS (1999)10.1073/pnas.97.10.5528
/ Proc. Natl Acad. Sci. / The E. coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities by EDWARDS (2000){'key': '10.1006/jtbi.2003.3071_RF7', 'first-page': '13', 'article-title': 'Metabolic flux balance analysis', 'author': 'EDWARDS', 'year': '1999'}
/ Metabolic flux balance analysis by EDWARDS (1999)10.1038/84379
/ Nature Biotechnol. / In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data by EDWARDS (2001)10.1002/bit.10047
/ Biotechnol. Bioeng. / Characterizing the metabolic phenotype: a pheno-type phase plane analysis by EDWARDS (2002){'key': '10.1006/jtbi.2003.3071_RF10', 'series-title': 'Understanding the Control of Metabolism', 'author': 'FELL', 'year': '1996'}
/ Understanding the Control of Metabolism by FELL (1996)10.1016/S0958-1669(00)00079-3
/ Curr. Opin. Biotechnol. / Mathematical model-ling of metabolism by GOMBERT (2000){'key': '10.1006/jtbi.2003.3071_RF12', 'series-title': 'The Regulation of Cellular Systems', 'author': 'HEINRICH', 'year': '1996'}
/ The Regulation of Cellular Systems by HEINRICH (1996){'key': '10.1006/jtbi.2003.3071_RF13', 'series-title': 'The Origins of Order', 'author': 'KAUFFMAN', 'year': '1993'}
/ The Origins of Order by KAUFFMAN (1993)10.1016/S0022-5193(85)80042-4
/ J. Theor. Biol. / Towards a logical analysis of the immune response by KAUFMAN (1985)10.1002/bit.260280715
/ Biotechnol. Bioeng. / Investigation of Bacterial Growth on Mixed Substrates. Experimental Evaluation of Cybernetic Models by KOMPALA (1986)10.1002/(SICI)1097-0290(19990320)62:6<722::AID-BIT11>3.0.CO;2-U
/ Biotechnol. Bioeng. / Incorporating qualitative knowledge in enzyme kinetic models using fuzzy logic by LEE (1999)10.1073/pnas.94.3.814
/ Proc. Natl Acad. Sci. U.S.A. / Stochastic mechanisms in gene expression by MCADAMS (1997)10.1146/annurev.biophys.27.1.199
/ Ann. Rev. Biophys. Biomol. Struct. / Simulation of prokaryotic genetic circuits by MCADAMS (1998)10.1016/S0168-9525(98)01659-X
/ Trends Genet. / It's a noisy business! Genetic regulation at the nanomolar scale by MCADAMS (1999)10.1126/science.7624793
/ Science / Circuit simulation of genetic networks by MCADAMS (1995)10.1038/81125
/ Nature Biotechnol. / The challenges of in silico biology by PALSSON (2000)-
PAPIN, J. A. Price, N. D. EDWARDS, J. S. PALSSON, B. O. The genome-scale metabolic extreme pathway structure in Haemophilus influenzae shows significant network redundancy, J. theor. Biol. 215, 67, 82
(
10.1006/jtbi.2001.2499
) {'key': '10.1006/jtbi.2003.3071_RF23', 'series-title': 'Energy Metabolism of the Cell', 'author': 'REICH', 'year': '1981'}
/ Energy Metabolism of the Cell by REICH (1981)10.1073/pnas.95.8.4193
/ Proc. Natl Acad. Sci. U.S.A. / The underlying pathway structure of biochemical reaction networks by SCHILLING (1998)-
SCHILLING, C. H. PALSSON, B. O. 2000, Assesment of the Metabolic Capabilities of Haemophilus influenzae Rd through a Genome-scale Pathway Analysis, J. theor. Biol. 203, 249, 283
(
10.1006/jtbi.2000.1088
) 10.1021/bp990048k
/ Biotechnol. Prog. / Metabolic pathway analysis: basic concepts and scientific applications in the post-genomic era by SCHILLING (1999)10.1002/1097-0290(2000)71:4<286::AID-BIT1018>3.0.CO;2-R
/ Biotechnol. Bioeng. / Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems by SCHILLING (2000)-
SCHILLING, C. H. LETSCHER, D. PALSSON, B. O. 2000b, Theory for the Systemic Definition of Metabolic Pathways and their use in Interpreting Metabolic Function from a Pathway-Oriented Perspective, J. theor. Biol. 203, 229, 248
(
10.1006/jtbi.2000.1073
) 10.1002/cplx.6130010612
/ Complexity / Modeling the complexity of genetic networks: understanding multigenic and pleitropic regulation by SOMOGYI (1996){'key': '10.1006/jtbi.2003.3071_RF30', 'series-title': 'Metabolic Engineering', 'author': 'STEPHANOPOULOS', 'year': '1998'}
/ Metabolic Engineering by STEPHANOPOULOS (1998){'key': '10.1006/jtbi.2003.3071_RF31', 'first-page': '277', 'article-title': 'Dynamical behaviour of biological regulatory networks—II. Immunity control in bacteriophage lambda', 'volume': '57', 'author': 'THIEFFRY', 'year': '1995', 'journal-title': 'Bull. Math. Biol.'}
/ Bull. Math. Biol. / Dynamical behaviour of biological regulatory networks—II. Immunity control in bacteriophage lambda by THIEFFRY (1995)10.1016/0022-5193(73)90247-6
/ J. theor. Biol. / Boolean formalization of genetic control circuits by THOMAS (1973)10.1016/S0022-5193(05)80350-9
/ J. theor. Biol. / Regulatory networks seen as asynchronous automata: a logical description by THOMAS (1991)10.1093/bioinformatics/15.1.72
/ Bioinformatics / E-CELL: software environment for whole-cell simulation by TOMITA (1999)10.1038/nbt1094-994
/ Bio. Technol. / Metabolic flux balancing: basic concepts, scientific and practical use by VARMA (1994)10.1002/bit.260430403
/ Biotechnol. Bioeng. / Predictions for oxy-gen supply control to enhance population stability of eng-ineered production strains by VARMA (1994)10.1128/AEM.60.10.3724-3731.1994
/ Appl. Environ. Microbiol. / Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type E. coli W3110 by VARMA (1994)10.1002/1097-0290(20000920)69:6<664::AID-BIT11>3.0.CO;2-H
/ Biotechnol. Bioeng. / Large-scale prediction of phenotype: concept by VARNER (2000)10.1021/bp970003o
/ Biotechnol. Prog. / Mathematical model of the lac operon: inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose by WONG (1997)
Dates
Type | When |
---|---|
Created | 22 years, 4 months ago (April 4, 2003, 5:33 p.m.) |
Deposited | 5 years, 5 months ago (March 18, 2020, 4:42 a.m.) |
Indexed | 5 months, 1 week ago (March 19, 2025, 12:36 p.m.) |
Issued | 22 years, 4 months ago (April 1, 2003) |
Published | 22 years, 4 months ago (April 1, 2003) |
Published Print | 22 years, 4 months ago (April 1, 2003) |
@article{COVERT_2003, title={Constraints-based models: Regulation of Gene Expression Reduces the Steady-state Solution Space}, volume={221}, ISSN={0022-5193}, url={http://dx.doi.org/10.1006/jtbi.2003.3071}, DOI={10.1006/jtbi.2003.3071}, number={3}, journal={Journal of Theoretical Biology}, publisher={Elsevier BV}, author={COVERT, MARKUS W. and PALSSON, BERNHARD O.}, year={2003}, month=apr, pages={309–325} }