DOI: 10.1006/jsbi.2001.4360. Purification, Crystallization, and Preliminary X-ray Diffraction Analysis of the Tricorn Protease Hexamer from Thermoplasma acidophilum

Purification, Crystallization, and Preliminary X-ray Diffraction Analysis of the Tricorn Protease Hexamer from Thermoplasma acidophilum

10.1006/jsbi.2001.4360

Crossref journal-article

Elsevier BV

Journal of Structural Biology (78)

Bibliography

Bosch, J., Tamura, T., Bourenkov, G., Baumeister, W., & Essen, L.-O. (2001). Purification, Crystallization, and Preliminary X-ray Diffraction Analysis of the Tricorn Protease Hexamer from Thermoplasma acidophilum. Journal of Structural Biology, 134(1), 83â87.

Authors 5

Jürgen Bosch (first)
Tomohiro Tamura (additional)
Gleb Bourenkov (additional)
Wolfgang Baumeister (additional)
Lars-Oliver Essen (additional)

References 18 Referenced 4

10.1074/jbc.272.3.1791 / J. Biol. Chem. / Processive degradation of proteins and other catalytic properties of the proteasome from Thermoplasma acidophilum by Akopian (1997)
10.1093/oxfordjournals.jbchem.a022689 / J. Biochem. / FtsH recognizes proteins with unfolded structure and hydrolyzes the carboxyl side of hydrophobic residues by Asahara (2000)
10.1016/S0092-8674(00)80929-0 / Cell / The proteasome: Paradigm of a self-compartmentalizing protease by Baumeister (1998)
10.1107/S0907444994003112 / Acta Crystallogr. Sect. D (1994)
10.1006/jsbi.1996.0006 / J. Struct. Biol. / The EM program package—A platform for image processing in biological electron microscopy by Hegerl (1996)
10.1074/jbc.273.4.1982 / J. Biol. Chem. / Range of sizes of peptide products generated during degradation of different proteins by archaeal proteasomes by Kisselev (1998)
10.1016/S0968-0004(97)01117-1 / Trends Biochem. Sci. / Self-compartmentalizing proteases by Lupas (1997)
{'key': '10.1006/jsbi.2001.4360_RF8', 'first-page': '447', 'article-title': 'beta-Propeller repeats and a PDZ domain in the Tricorn protease: Predicted self-compartmentalisation and C-terminal polypeptide-binding strategies of substrate selection', 'volume': '179', 'author': 'Ponting', 'year': '1999', 'journal-title': 'FEMS Microbiol. Lett.'} / FEMS Microbiol. Lett. / beta-Propeller repeats and a PDZ domain in the Tricorn protease: Predicted self-compartmentalisation and C-terminal polypeptide-binding strategies of substrate selection by Ponting (1999)
10.1016/S0092-8674(00)81634-7 / Cell / The role of Tricorn protease and its aminopeptidase-interacting factors in cellular protein degradation by Tamura (1998)
10.1515/BC.2001.055 / Biol. Chem. / Tricorn protease in bacteria: Characterization of the enzyme from Streptomyces coelicolor by Tamura (2001)
10.1126/science.274.5291.1385 / Science / Tricorn protease—The core of a modular proteolytic system by Tamura (1996)
10.1016/S0014-5793(96)01163-5 / FEBS Lett. / Tricorn protease (TRI) interacting factor 1 from Thermoplasma acidophilum is a proline iminopeptidase by Tamura (1996)
10.1016/S0021-9258(17)32436-5 / J. Biol. Chem. / Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli by Thompson (1994)
10.1107/S0108767390005530 / Acta Crystallogr. Sect. A / The locked rotation function by Tong (1990)
10.1006/jsbi.1999.4169 / J. Struct. Biol. / Capsids of Tricorn protease studied by electron cryomicroscopy by Walz (1999)
10.1016/S1097-2765(00)80007-6 / Mol. Cell / Tricorn protease exists as an icosahedral supermolecule in vivo by Walz (1997)
10.1006/jsbi.1998.4058 / J. Struct. Biol. / Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask by Wang (1998)
10.1016/0014-5793(94)00665-2 / FEBS Lett. / Existence of a molecular ruler in proteasomes suggested by analysis of degradation products by Wenzel (1994)

Dates

Type	When
Created	22 years, 11 months ago (Sept. 18, 2002, 2:57 p.m.)
Deposited	4 years, 3 months ago (May 2, 2021, 11:28 p.m.)
Indexed	2 years ago (Aug. 26, 2023, 1:02 a.m.)
Issued	24 years, 4 months ago (April 1, 2001)
Published	24 years, 4 months ago (April 1, 2001)
Published Print	24 years, 4 months ago (April 1, 2001)

Funders 0

None

BibTeX

@article{Bosch_2001, title={Purification, Crystallization, and Preliminary X-ray Diffraction Analysis of the Tricorn Protease Hexamer from Thermoplasma acidophilum}, volume={134}, ISSN={1047-8477}, url={http://dx.doi.org/10.1006/jsbi.2001.4360}, DOI={10.1006/jsbi.2001.4360}, number={1}, journal={Journal of Structural Biology}, publisher={Elsevier BV}, author={Bosch, Jürgen and Tamura, Tomohiro and Bourenkov, Gleb and Baumeister, Wolfgang and Essen, Lars-Oliver}, year={2001}, month=apr, pages={83–87} }

JSON

{
  "indexed": {
    "date-parts": [
      [
        2023,
        8,
        26
      ]
    ],
    "date-time": "2023-08-26T05:02:58Z",
    "timestamp": 1693026178788
  },
  "reference-count": 18,
  "publisher": "Elsevier BV",
  "issue": "1",
  "license": [
    {
      "start": {
        "date-parts": [
          [
            2001,
            4,
            1
          ]
        ],
        "date-time": "2001-04-01T00:00:00Z",
        "timestamp": 986083200000
      },
      "content-version": "tdm",
      "delay-in-days": 0,
      "URL": "https://www.elsevier.com/tdm/userlicense/1.0/"
    }
  ],
  "content-domain": {
    "domain": [],
    "crossmark-restriction": false
  },
  "published-print": {
    "date-parts": [
      [
        2001,
        4
      ]
    ]
  },
  "DOI": "10.1006/jsbi.2001.4360",
  "type": "journal-article",
  "created": {
    "date-parts": [
      [
        2002,
        9,
        18
      ]
    ],
    "date-time": "2002-09-18T18:57:36Z",
    "timestamp": 1032375456000
  },
  "page": "83-87",
  "source": "Crossref",
  "is-referenced-by-count": 4,
  "title": "Purification, Crystallization, and Preliminary X-ray Diffraction Analysis of the Tricorn Protease Hexamer from Thermoplasma acidophilum",
  "prefix": "10.1016",
  "volume": "134",
  "author": [
    {
      "given": "J\u00fcrgen",
      "family": "Bosch",
      "sequence": "first",
      "affiliation": []
    },
    {
      "given": "Tomohiro",
      "family": "Tamura",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Gleb",
      "family": "Bourenkov",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Wolfgang",
      "family": "Baumeister",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Lars-Oliver",
      "family": "Essen",
      "sequence": "additional",
      "affiliation": []
    }
  ],
  "member": "78",
  "reference": [
    {
      "key": "10.1006/jsbi.2001.4360_RF1",
      "doi-asserted-by": "crossref",
      "first-page": "1791",
      "DOI": "10.1074/jbc.272.3.1791",
      "article-title": "Processive degradation of proteins and other catalytic properties of the proteasome from Thermoplasma acidophilum",
      "volume": "272",
      "author": "Akopian",
      "year": "1997",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF2",
      "doi-asserted-by": "crossref",
      "first-page": "931",
      "DOI": "10.1093/oxfordjournals.jbchem.a022689",
      "article-title": "FtsH recognizes proteins with unfolded structure and hydrolyzes the carboxyl side of hydrophobic residues",
      "volume": "127",
      "author": "Asahara",
      "year": "2000",
      "journal-title": "J. Biochem."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF3",
      "doi-asserted-by": "crossref",
      "first-page": "367",
      "DOI": "10.1016/S0092-8674(00)80929-0",
      "article-title": "The proteasome: Paradigm of a self-compartmentalizing protease",
      "volume": "92",
      "author": "Baumeister",
      "year": "1998",
      "journal-title": "Cell"
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF4",
      "doi-asserted-by": "crossref",
      "first-page": "760",
      "DOI": "10.1107/S0907444994003112",
      "volume": "50",
      "year": "1994",
      "journal-title": "Acta Crystallogr. Sect. D"
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF5",
      "doi-asserted-by": "crossref",
      "first-page": "30",
      "DOI": "10.1006/jsbi.1996.0006",
      "article-title": "The EM program package\u2014A platform for image processing in biological electron microscopy",
      "volume": "116",
      "author": "Hegerl",
      "year": "1996",
      "journal-title": "J. Struct. Biol."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF6",
      "doi-asserted-by": "crossref",
      "first-page": "1982",
      "DOI": "10.1074/jbc.273.4.1982",
      "article-title": "Range of sizes of peptide products generated during degradation of different proteins by archaeal proteasomes",
      "volume": "273",
      "author": "Kisselev",
      "year": "1998",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF7",
      "doi-asserted-by": "crossref",
      "first-page": "399",
      "DOI": "10.1016/S0968-0004(97)01117-1",
      "article-title": "Self-compartmentalizing proteases",
      "volume": "22",
      "author": "Lupas",
      "year": "1997",
      "journal-title": "Trends Biochem. Sci."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF8",
      "first-page": "447",
      "article-title": "beta-Propeller repeats and a PDZ domain in the Tricorn protease: Predicted self-compartmentalisation and C-terminal polypeptide-binding strategies of substrate selection",
      "volume": "179",
      "author": "Ponting",
      "year": "1999",
      "journal-title": "FEMS Microbiol. Lett."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF9",
      "doi-asserted-by": "crossref",
      "first-page": "637",
      "DOI": "10.1016/S0092-8674(00)81634-7",
      "article-title": "The role of Tricorn protease and its aminopeptidase-interacting factors in cellular protein degradation",
      "volume": "95",
      "author": "Tamura",
      "year": "1998",
      "journal-title": "Cell"
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF10",
      "doi-asserted-by": "crossref",
      "first-page": "449",
      "DOI": "10.1515/BC.2001.055",
      "article-title": "Tricorn protease in bacteria: Characterization of the enzyme from Streptomyces coelicolor",
      "volume": "382",
      "author": "Tamura",
      "year": "2001",
      "journal-title": "Biol. Chem."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF11",
      "doi-asserted-by": "crossref",
      "first-page": "1385",
      "DOI": "10.1126/science.274.5291.1385",
      "article-title": "Tricorn protease\u2014The core of a modular proteolytic system",
      "volume": "274",
      "author": "Tamura",
      "year": "1996",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF12",
      "doi-asserted-by": "crossref",
      "first-page": "101",
      "DOI": "10.1016/S0014-5793(96)01163-5",
      "article-title": "Tricorn protease (TRI) interacting factor 1 from Thermoplasma acidophilum is a proline iminopeptidase",
      "volume": "398",
      "author": "Tamura",
      "year": "1996",
      "journal-title": "FEBS Lett."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF13",
      "doi-asserted-by": "crossref",
      "first-page": "18209",
      "DOI": "10.1016/S0021-9258(17)32436-5",
      "article-title": "Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli",
      "volume": "269",
      "author": "Thompson",
      "year": "1994",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF14",
      "doi-asserted-by": "crossref",
      "first-page": "783",
      "DOI": "10.1107/S0108767390005530",
      "article-title": "The locked rotation function",
      "volume": "46",
      "author": "Tong",
      "year": "1990",
      "journal-title": "Acta Crystallogr. Sect. A"
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF15",
      "doi-asserted-by": "crossref",
      "first-page": "65",
      "DOI": "10.1006/jsbi.1999.4169",
      "article-title": "Capsids of Tricorn protease studied by electron cryomicroscopy",
      "volume": "128",
      "author": "Walz",
      "year": "1999",
      "journal-title": "J. Struct. Biol."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF16",
      "doi-asserted-by": "crossref",
      "first-page": "59",
      "DOI": "10.1016/S1097-2765(00)80007-6",
      "article-title": "Tricorn protease exists as an icosahedral supermolecule in vivo",
      "volume": "1",
      "author": "Walz",
      "year": "1997",
      "journal-title": "Mol. Cell"
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF17",
      "doi-asserted-by": "crossref",
      "first-page": "151",
      "DOI": "10.1006/jsbi.1998.4058",
      "article-title": "Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask",
      "volume": "124",
      "author": "Wang",
      "year": "1998",
      "journal-title": "J. Struct. Biol."
    },
    {
      "key": "10.1006/jsbi.2001.4360_RF18",
      "doi-asserted-by": "crossref",
      "first-page": "205",
      "DOI": "10.1016/0014-5793(94)00665-2",
      "article-title": "Existence of a molecular ruler in proteasomes suggested by analysis of degradation products",
      "volume": "349",
      "author": "Wenzel",
      "year": "1994",
      "journal-title": "FEBS Lett."
    }
  ],
  "container-title": "Journal of Structural Biology",
  "original-title": [],
  "language": "en",
  "link": [
    {
      "URL": "https://api.elsevier.com/content/article/PII:S1047847701943606?httpAccept=text/xml",
      "content-type": "text/xml",
      "content-version": "vor",
      "intended-application": "text-mining"
    },
    {
      "URL": "https://api.elsevier.com/content/article/PII:S1047847701943606?httpAccept=text/plain",
      "content-type": "text/plain",
      "content-version": "vor",
      "intended-application": "text-mining"
    }
  ],
  "deposited": {
    "date-parts": [
      [
        2021,
        5,
        3
      ]
    ],
    "date-time": "2021-05-03T03:28:08Z",
    "timestamp": 1620012488000
  },
  "score": 1,
  "resource": {
    "primary": {
      "URL": "https://linkinghub.elsevier.com/retrieve/pii/S1047847701943606"
    }
  },
  "subtitle": [],
  "short-title": [],
  "issued": {
    "date-parts": [
      [
        2001,
        4
      ]
    ]
  },
  "references-count": 18,
  "journal-issue": {
    "issue": "1",
    "published-print": {
      "date-parts": [
        [
          2001,
          4
        ]
      ]
    }
  },
  "alternative-id": [
    "S1047847701943606"
  ],
  "URL": "http://dx.doi.org/10.1006/jsbi.2001.4360",
  "relation": {},
  "ISSN": [
    "1047-8477"
  ],
  "subject": [],
  "container-title-short": "Journal of Structural Biology",
  "published": {
    "date-parts": [
      [
        2001,
        4
      ]
    ]
  }
}