DOI: 10.1006/jsbi.2000.4279. Local Average Intensity-Based Method for Identifying Spherical Particles in Electron Micrographs

Local Average Intensity-Based Method for Identifying Spherical Particles in Electron Micrographs

10.1006/jsbi.2000.4279

Crossref journal-article

Elsevier BV

Journal of Structural Biology (78)

Bibliography

Kivioja, T., Ravantti, J., Verkhovsky, A., Ukkonen, E., & Bamford, D. (2000). Local Average Intensity-Based Method for Identifying Spherical Particles in Electron Micrographs. Journal of Structural Biology, 131(2), 126â134.

Authors 5

Teemu Kivioja (first)
Janne Ravantti (additional)
Anatoly Verkhovsky (additional)
Esko Ukkonen (additional)
Dennis Bamford (additional)

References 23 Referenced 98

10.1006/jsbi.1996.0020 / J. Struct. Biol. / A model-based approach for determining orientations of biological macromolecules imagined by cryoelectron microscopy by Baker (1996)
10.1128/MMBR.63.4.862-922.1999 / Microbiol. Mol. Biol. Rev. / Adding the third dimension to virus life cycles: Three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs by Baker (1999)
10.1016/S0065-3527(08)60064-0 / Adv. Virus Res. / Bacteriophage PRD1: A broad host range dsDNA tectivirus with an internal membrane by Bamford (1995)
10.1006/jsbi.1997.3901 / J. Struct. Biol. / Identification of spherical virus particles in digitized images of entire electron micrographs by Boier Martin (1997)
10.1038/386088a0 / Nature / Determination of the fold of core protein of hepatitis B virus by electron cryomicroscopy by Böttcher (1997)
Butcher, S. J. 1999, Personal communication.
10.1002/j.1460-2075.1995.tb00298.x / EMBO J. / DNA packaging orders the membrane of bacteriophage PRD1 by Butcher (1995)
10.1006/jsbi.1998.4055 / J. Struct. Biol. / Structure of the human cytomegalovirus B capsid by electron cryomicroscopy and image reconstruction by Butcher (1998)
10.1006/jsbi.1996.0003 / J. Struct. Biol. / MRC image processing programs by Crowther (1996)
10.1016/0304-3991(83)90256-5 / Ultramicroscopy / Automatic selection of molecular images from electron micrographs by Frank (1984)
10.1006/jsbi.1996.0009 / J. Struct. Biol. / Three-dimensional reconstruction of icosahedral particles—The uncommon line by Fuller (1996)
10.1016/S0167-8655(97)00045-7 / Pattern Recognition Lett. / Fast computation of moving average and related filters in octagonal windows by Glasbey (1997)
10.1016/S0969-2126(01)00237-4 / Structure / Evolutionary conservation in the hepatitis B virus core structure: Comparison of human and duck cores by Kenney (1995)
10.1016/0304-3991(95)00002-I / Ultramicroscopy / Automatic particle picking from electron micrographs by Lata (1995)
10.1006/jmbi.1998.1859 / J. Mol. Biol. / Escheria coli 70s ribosome at 15 Å resolution by cryo-electron microscopy: Localization of fMet-traRNAMetf and fitting of L1 protein by Malhotra (1998)
10.1016/S0031-3203(97)00107-6 / Pattern Recognition / Automatic registration of images of pigmented skin lesions by McGregor (1998)
10.1016/0304-3991(89)90057-0 / Ultramicroscopy / Magnification calibration and determination of spherical virus diameters using cryo-microscopy by Olson (1989)
10.1006/jmbi.1999.2978 / J. Mol. Biol. / Bacteriophage PRD1 contains a labile receptor binding structure at each vertex by Rydman (1999)
Saad, A, Chiu, W, and, Thuman-Commike, P. A. 1998, Multiresolution approach to automatic detection of spherical particles from electron microscopy images, in, Proceedings of the IEEE 5th International Conference on Image Processing, Chicago, Illinois, 4-7.10.1998.
Spitzak, B. 1998, Fast Light Tool Kit, http://fltk.easysw.com/.
10.1046/j.1365-2818.1997.1320690.x / J. Microsc. / Automated detection of macromolecules from electron micrographs using advanced filter techniques by Stoschek (1997)
10.1006/jsbi.1996.0008 / J. Struct. Biol. / PTOOL: A software package for the selection of particles from electron cryomicroscopy spot-scan images by Thuman-Commike (1996)
{'key': '10.1006/jsbi.2000.4279_RF23', 'first-page': '331', 'article-title': 'Detection of objects in quantum-noise-limited images', 'volume': '8', 'author': 'van Heel', 'year': '1981', 'journal-title': 'Ultramicroscopy'} / Ultramicroscopy / Detection of objects in quantum-noise-limited images by van Heel (1981)

Dates

Type	When
Created	22 years, 11 months ago (Sept. 18, 2002, 10:57 a.m.)
Deposited	4 years, 3 months ago (May 2, 2021, 6:26 p.m.)
Indexed	3 weeks ago (Aug. 7, 2025, 4:52 p.m.)
Issued	25 years ago (Aug. 1, 2000)
Published	25 years ago (Aug. 1, 2000)
Published Print	25 years ago (Aug. 1, 2000)

Funders 0

None

BibTeX

@article{Kivioja_2000, title={Local Average Intensity-Based Method for Identifying Spherical Particles in Electron Micrographs}, volume={131}, ISSN={1047-8477}, url={http://dx.doi.org/10.1006/jsbi.2000.4279}, DOI={10.1006/jsbi.2000.4279}, number={2}, journal={Journal of Structural Biology}, publisher={Elsevier BV}, author={Kivioja, Teemu and Ravantti, Janne and Verkhovsky, Anatoly and Ukkonen, Esko and Bamford, Dennis}, year={2000}, month=aug, pages={126–134} }

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