DOI: 10.1006/jmbi.1999.3106. Backbone Dynamics of a Winged Helix Protein and its DNA Complex at Different Temperatures: Changes of Internal Motions in Genesis upon Binding to DNA

Backbone Dynamics of a Winged Helix Protein and its DNA Complex at Different Temperatures: Changes of Internal Motions in Genesis upon Binding to DNA

10.1006/jmbi.1999.3106

Crossref journal-article

Elsevier BV

Journal of Molecular Biology (78)

Authors 2

Changwen Jin (first)
Xiubei Liao (additional)

References 30 Referenced 21

{'key': '10.1006/jmbi.1999.3106_RF1', 'series-title': 'Principles of Nuclear Magnetism', 'author': 'Abragam', 'year': '1961'} / Principles of Nuclear Magnetism by Abragam (1961)
10.1021/bi00138a005 / Biochemistry / Backbone dynamics of calmodulin studied by15N relaxation using inverse detected two-dimensional NMR spectroscopy: the central helix is flexible by Barbato (1992)
10.1063/1.1696168 / J. Chem. Phys. / Spin echos and chemical exchange by Bloom (1965)
10.1093/nar/25.14.2888 / Nucl. Acids Res. / Different DNA contact schemes are used by two winged helix proteins to recognize a DNA binding sequence by Bravieri (1997)
10.1126/science.7754375 / Science / Long-range motional restrictions in a multidomain zinc-finger protein from anisotropic tumbling by Brüschweiler (1995)
10.1038/364412a0 / Nature / Cocrystal structure of the HNF-3/fork head DNA recognition motif resembles histone H5 by Clark (1993)
10.1073/pnas.90.9.3948 / Proc. Natl Acad. Sci. USA / Identification of nine tissue-specific transcription factors of the hepatocyte nuclear factor 3/forkhead DNA-binding-domain family by Clevidence (1993)
10.1006/jmbi.1998.1837 / J. Mol. Biol. / Backbone dynamics of the EGF-like domain of heregulin-α by Fairbrother (1998)
10.1007/BF00211779 / J. Biomol. NMR / Spectra density function mapping using15N relaxation data exclusively by Farrow (1995)
10.1021/ja00216a006 / J. Am. Chem. Soc. / Determination of15N chemical shift tensor via15N-2H dipolar coupling in Bocglycyl-glycyl [15N]glycine benzyl ester by Hiyama (1988)
10.1006/jmrb.1995.1104 / J. Magn. Reson. ser. B / Quasi-spectral- density function analysis for nitrogen-15 nuclei in proteins by Ishima (1995)
10.1021/bi980031v / Biochemistry / Sequence specific collective motions in a winged helix DNA binding domain detected by15N relaxation NMR by Jin (1998)
10.1006/jmbi.1999.2819 / J. Mol. Biol. / Dynamic DNA contacts observed in the NMR structure of winged helix protein-DNA complex by Jin (1999)
10.1016/0925-4773(96)00539-4 / Mech. Dev. / Five years on the wings of fork head by Kaufmann (1996)
10.1101/gad.4.8.1427 / Genes Dev. / HNF-3γ, a hepatocyte-enriched transcription factor of novel structure is regulated transcriptionally by Lai (1990)
10.1023/A:1018631009583 / J. Biomol. NMR / Rotational diffusion anisotropy of proteins from simultaneous analysis of15N and13Cαnuclear spin relaxation by Lee (1997)
10.1021/ja00381a009 / J. Am. Chem. Soc. / Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules. 1, Theory and range of validity by Lipari (1982)
10.1021/ja00381a010 / J. Am. Chem. Soc. / Model-free approach to the interpretation of nuclear magnetic resonance relaxation in macromolecules. 2. Analysis of experimental results by Lipari (1982)
10.1021/bi962089k / Biochemistry / Dynamics of ribonuclease H: temperature dependence of motions on multiple time scales by Mandel (1996)
10.1063/1.1676626 / J. Chem. Phys. / Spin-lattice relaxation measurements in slowly relaxing complex spectra by Markley (1971)
10.1006/jmbi.1998.1703 / J. Mol. Biol. / Structural changes in the region directly adjacent to the DNA-binding helix highlight a possible mechanism to explain the observed changes in the sequence-specific binding of winged helix proteins by Marsden (1998)
10.1128/MCB.14.4.2755 / Mol. Cell. Biol. / HNF-3/fkh domain protein chimeras suggest that sequences outside of the recognition helix are involved in DNA binding specificity by Overdier (1994)
10.1021/jp9606117 / J. Phys. Chem. / Nuclear magnetic resonance studies of biopolymer dynamics by Palmer (1996)
10.1021/bi00151a027 / Biochemistry / Mapping of the spectral densities of N-H bond motions in eglin c using heteronuclear relaxation experiments by Peng (1992)
10.1021/bi00051a023 / Biochemistry / Frequency spectrum of NH bonds in eglin c from spectral density mapping at multiple fields by Peng (1995)
{'key': '10.1006/jmbi.1999.3106_RF26', 'series-title': 'Numerical Recipes', 'author': 'Press', 'year': '1989'} / Numerical Recipes by Press (1989)
10.1006/abbi.1998.1040 / Arch. Biochem. Biophys. / The dissociation rate of a winged helix protein-DNA complex is influenced by non-DNA contact residues by Shiyanova (1999)
10.1074/jbc.271.38.23126 / J. Biol. Chem. / Genesis, a winged helix transcriptional repressor with expression restricted to embryonic stem cells by Sutton (1996)
10.1006/viro.1997.8846 / Virology / Revelations of a captive: retroviral Qin and the oncogenicity of winged helix proteins by Vogt (1997)
10.1016/0092-8674(90)90439-L / Cell / The fork head domain: a novel DNA binding motif of eukaryotic transcription factors by Weigel (1990)

Dates

Type	When
Created	22 years, 10 months ago (Oct. 7, 2002, 12:21 p.m.)
Deposited	6 years, 3 months ago (May 7, 2019, 11:27 a.m.)
Indexed	1 month, 4 weeks ago (June 26, 2025, 9:28 a.m.)
Issued	25 years, 11 months ago (Sept. 1, 1999)
Published	25 years, 11 months ago (Sept. 1, 1999)
Published Print	25 years, 11 months ago (Sept. 1, 1999)

Funders 0

None

BibTeX

@article{Jin_1999, title={Backbone Dynamics of a Winged Helix Protein and its DNA Complex at Different Temperatures: Changes of Internal Motions in Genesis upon Binding to DNA}, volume={292}, ISSN={0022-2836}, url={http://dx.doi.org/10.1006/jmbi.1999.3106}, DOI={10.1006/jmbi.1999.3106}, number={3}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Jin, Changwen and Liao, Xiubei}, year={1999}, month=sep, pages={641–651} }

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