DOI: 10.1006/jmbi.1997.1395. Identification of functional surfaces of the zinc binding domains of intracellular receptors

Identification of functional surfaces of the zinc binding domains of intracellular receptors

10.1006/jmbi.1997.1395

Crossref journal-article

Elsevier BV

Journal of Molecular Biology (78)

Bibliography

Lichtarge, O., Yamamoto, K. R., & Cohen, F. E. (1997). Identification of functional surfaces of the zinc binding domains of intracellular receptors. Journal of Molecular Biology, 274(3), 325â337.

Authors 3

Olivier Lichtarge (first)
Keith R Yamamoto (additional)
Fred E Cohen (additional)

References 62 Referenced 86

10.1126/science.272.5266.1278 / Science / The origin of programmed cell death by Ameisen (1996)
10.1210/me.6.1.3 / Mol. Endocrinol. / The origin of nuclear receptor proteins by Amero (1992)
10.1038/322747a0 / Nature / Continuous and discontinuous protein antigenic determinants by Barlow (1986)
10.1016/0065-2571(89)90073-3 / Advan. Enzyme Regul. / Patterns of divergence in homologous proteins as indicators of tertiary and quaternary structure by Benner (1989)
10.1093/protein/3.3.153 / Protein Eng. / Construction of validated, non-redundant composite protein sequence databases by Bleasby (1990)
10.1038/257197a0 / Nature / Is the evolution of insulin Darwinian or due to selectively neutral mutation? by Blundell (1975)
10.1128/MCB.16.2.584 / Mol. Cell. Biol. / A composite element binding the vitamin D receptor, retinoid X receptor alpha, and a member of the CTF/NF-1 family of transcription factors mediates the vitamin D responsiveness of the c-fos promoter by Candeliere (1996)
10.1038/339593a0 / Nature / Protein encoded by v-erbA functions as a thyroid-hormone receptor antagonist by Damm (1989)
10.1093/nar/12.1Part1.387 / Nucl. Acids Res. / A comprehensive set of sequence analysis programs for the VAX by Devereux (1984)
{'key': '10.1006/jmbi.1997.1395_BIB10', 'first-page': '61', 'article-title': 'The evolution and structure of aminergic G protein-coupled receptors', 'volume': '2', 'author': 'Donnelly', 'year': '1994', 'journal-title': 'Receptors Channels'} / Receptors Channels / The evolution and structure of aminergic G protein-coupled receptors by Donnelly (1994)
10.1007/BF02603120 / J. Mol. Evol. / Progressive sequence alignment as a prerequisite to correct phylogenetic trees by Feng (1987)
10.1126/science.7542800 / Science / Whole-genome random sequencing and assembly of Haemophilus influenzae Rd by Fleischmann (1995)
10.1016/0955-0674(95)80091-3 / Curr. Opin. Cell Biol. / Higher-order nucleoprotein complexes in transcription by Grosschedl (1995)
10.1128/MCB.13.5.3113 / Mol. Cell Biol. / The orphan receptor Rev-ErbA alpha activates transcription via a novel response element by Harding (1993)
10.1126/science.7761829 / Science / Classical electrostatics in biology and chemistry by Honig (1995)
10.1016/S0021-9258(18)53327-5 / J. Biol. Chem. / Glucocorticoid receptor-cAMP response element-binding protein interaction and the response of the phosphoenolpyruvate carboxykinase gene to glucocorticoids by Imai (1993)
10.1016/S0021-9258(17)46181-3 / J. Biol. Chem. / The structure of protein-protein recognition sites by Janim (1990)
10.1006/jmbi.1997.1233 / J. Mol. Biol. / Prediction of protein-protein interaction sites using patch analysis by Jones (1997)
10.1038/329734a0 / Nature / Oestrogen and glucocorticoid responsive elements are closely related but distinct by Klock (1987)
10.1002/j.1460-2075.1992.tb05283.x / Embo J. / Interference between pathway-specific transcription factors by Konig (1992)
10.1126/science.274.5287.536 / Science / The new genomics by Lander (1996)
10.1002/j.1460-2075.1992.tb05139.x / Embo J. / Evolution of the nuclear receptor gene superfamily by Laudet (1992)
10.1126/science.8388124 / Science / Structure of the retinoid X receptor alpha DNA binding domain by Lee (1993)
10.1073/pnas.93.15.7507 / Proc Natl Acad Sci USA / Evolutionarily conserved Gabg binding surfaces support a model of the G protein-receptor complex by Lichtarge (1996)
10.1006/jmbi.1996.0167 / J. Mol. Biol. / An evolutionary trace method defines binding surfaces common to protein families by Lichtarge (1996)
10.1073/pnas.92.26.12480 / Proc Natl Acad Sci USA / Steroid receptor heterodimerization demonstrated in vitro and in vivo by Liu (1995)
10.1038/352497a0 / Nature / Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA by Luisi (1991)
10.1006/jmbi.1996.0548 / J. Mol. Biol. / Antibody-antigen interactions by MacCallum (1996)
10.1038/338271a0 / Nature / Three amino acids of the oestrogen receptor are essential to its ability to distinguish an oestrogen from a glucocorticoid-responsive element by Mader (1989)
10.1002/j.1460-2075.1993.tb06196.x / Embo J. / The patterns of binding of RAR, RXR and TR homo- and heterodimers to direct repeats are dictated by the binding specificites of the DNA binding domains by Mader (1993)
10.1002/j.1460-2075.1987.tb02706.x / Embo J. / The estrogen-responsive element as an inducible enhancer by Martinez (1987)
10.1093/nar/21.21.4936 / Nucl. Acids Res. / Ribosomal protein L25 from Trypanosoma brucei by Metzenberg (1993)
10.1038/312779a0 / Nature / Characterization of a steroid hormone receptor gene and mRNA in wild-type and mutant cells by Miesfeld (1984)
10.1038/328834a0 / Nature / The accessible surface area and stability of oligomeric proteins by Miller (1987)
10.1016/S0958-1669(96)80118-2 / Curr. Opin. Biotechnol. / The current state of the art in protein structure prediction by Moult (1996)
10.1038/368251a0 / Nature / Co-evolution of ligand-receptor pairs by Moyle (1994)
10.1006/jmbi.1995.0159 / J. Mol. Biol. / SCOP by Murzin (1995)
10.1126/science.275.5298.381 / Science / Receptor and beta gamma binding sites in the alpha subunit of the retinal G protein transducin by Onrust (1997)
10.1126/science.1546296 / Science / Spatial control of the gap gene knirps in the Drosophila embryo by posterior morphogen system by Pankratz (1992)
10.1016/0955-0674(93)90016-J / Curr. Opin. Cell. Biol. / Steroid and related receptors by Parker (1993)
10.1126/science.8382376 / Science / Mineralocorticoid and glucocorticoid receptor activities distinguished by nonreceptor factors at a composite response element by Pearce (1993)
10.1073/pnas.85.8.2444 / Proc. Natl Acad. Sci. USA / Improved tools for biological sequence comparison by Pearson (1988)
10.1038/375203a0 / Nature / Structural determinants of nuclear receptor assembly on DNA direct repeats by Rastinejad (1995)
10.1146/annurev.bb.25.060196.000553 / Annu. Rev. Biophys. Biomol. Struct. / Bridging the protein sequence-structure gap by structure predictions by Rost (1996)
10.1210/me.9.4.413 / Mol. Endocrinol. / In vivo footprinting of an androgen-dependent enhancer reveals an accessory element integral to hormonal response by Scarlett (1995)
10.1006/jmbi.1995.0235 / J. Mol. Biol. / Energetics of protein-protein interactions by Schreiber (1995)
10.1038/348458a0 / Nature / Solution structure of the DNA-binding domain of the oestrogen receptor by Schwabe (1990)
10.1016/0092-8674(93)90390-C / Cell / The crystal structure of the estrogen receptor DNA-binding domain bound to DNA by Schwabe (1993)
10.1016/0092-8674(91)90435-2 / Cell / v-erbA oncogene function in neoplasia correlates with its ability to repress retinoic acid receptor action by Sharif (1991)
10.1038/383347a0 / Nature / Rhodopsin activation blocked by metal-ion-binding sites linking transmembrane helices C and F by Sheikh (1996)
{'key': '10.1006/jmbi.1997.1395_BIB51', 'series-title': 'Numerical Taxonomy', 'first-page': '230', 'author': 'Sneath', 'year': '1973'} / Numerical Taxonomy by Sneath (1973)
10.1101/gad.10.10.1271 / Genes Dev. / Intracellular receptors use a common mechanism to interpret signaling information at response elements by Starr (1996)
10.1093/protein/8.4.329 / Protein Eng. / DNA recognition and superstructure formation by helix-turn-helix proteins by Suzuki (1995)
{'key': '10.1006/jmbi.1997.1395_BIB54', 'series-title': 'The case for DNA mediated allosteric regulation of the glucocorticoid receptor. Ph.D thesis', 'author': 'Thomas', 'year': '1993'} / The case for DNA mediated allosteric regulation of the glucocorticoid receptor. Ph.D thesis by Thomas (1993)
10.1146/annurev.bi.63.070194.002315 / Annu. Rev. Biochem. / Molecular mechanisms of action of steroid/thyroid receptor superfamily members by Tsai (1994)
10.1016/0092-8674(89)90051-2 / Cell / Determinants of target gene specificity for steroid/thyroid hormone receptors by Umesono (1989)
10.1016/0955-0674(94)90132-5 / Curr. Opin. Cell. Biol. / Structural and functional basis for hormone binding and receptor oligomerization by Wells (1994)
10.1128/MCB.13.9.5794 / Mol. Cell. Biol. / The orphan receptors NGFI-B and steroidogenic factor 1 establish monomer binding as a third paradigm of nuclear receptor-DNA interaction by Wilson (1993)
10.1006/jmbi.1996.0514 / J. Mol. Biol. / Structural classification of HTH DNA-binding domains and protein-DNA interaction modes by Wintjens (1996)
10.1074/jbc.271.10.5795 / J. Biol. Chem. / Estrogen-related receptor, hERR1 modulates estrogen receptor-mediated response of human lactoferrin gene promoter by Yang (1996)
10.1146/annurev.bi.64.070195.002533 / Annu. Rev. Biochem. / Common themes in assembly and function of eukaryotic transcription complexes by Zawel (1995)
10.1016/0022-5193(65)90083-4 / J. Theoret. Biol. / Molecules as documents of evolutionary history by Zuckerkandl (1965)

Dates

Type	When
Created	22 years, 11 months ago (Sept. 18, 2002, 3:24 p.m.)
Deposited	4 years, 4 months ago (May 2, 2021, 9:18 p.m.)
Indexed	1 month, 2 weeks ago (July 20, 2025, 6:45 p.m.)
Issued	27 years, 9 months ago (Dec. 1, 1997)
Published	27 years, 9 months ago (Dec. 1, 1997)
Published Print	27 years, 9 months ago (Dec. 1, 1997)

Funders 0

None

BibTeX

@article{Lichtarge_1997, title={Identification of functional surfaces of the zinc binding domains of intracellular receptors}, volume={274}, ISSN={0022-2836}, url={http://dx.doi.org/10.1006/jmbi.1997.1395}, DOI={10.1006/jmbi.1997.1395}, number={3}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Lichtarge, Olivier and Yamamoto, Keith R and Cohen, Fred E}, year={1997}, month=dec, pages={325–337} }

JSON

{
  "indexed": {
    "date-parts": [
      [
        2025,
        7,
        20
      ]
    ],
    "date-time": "2025-07-20T22:45:51Z",
    "timestamp": 1753051551057
  },
  "reference-count": 62,
  "publisher": "Elsevier BV",
  "issue": "3",
  "license": [
    {
      "start": {
        "date-parts": [
          [
            1997,
            12,
            1
          ]
        ],
        "date-time": "1997-12-01T00:00:00Z",
        "timestamp": 880934400000
      },
      "content-version": "tdm",
      "delay-in-days": 0,
      "URL": "https://www.elsevier.com/tdm/userlicense/1.0/"
    }
  ],
  "content-domain": {
    "domain": [],
    "crossmark-restriction": false
  },
  "published-print": {
    "date-parts": [
      [
        1997,
        12
      ]
    ]
  },
  "DOI": "10.1006/jmbi.1997.1395",
  "type": "journal-article",
  "created": {
    "date-parts": [
      [
        2002,
        9,
        18
      ]
    ],
    "date-time": "2002-09-18T19:24:54Z",
    "timestamp": 1032377094000
  },
  "page": "325-337",
  "source": "Crossref",
  "is-referenced-by-count": 86,
  "title": "Identification of functional surfaces of the zinc binding domains of intracellular receptors",
  "prefix": "10.1006",
  "volume": "274",
  "author": [
    {
      "given": "Olivier",
      "family": "Lichtarge",
      "sequence": "first",
      "affiliation": []
    },
    {
      "given": "Keith R",
      "family": "Yamamoto",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Fred E",
      "family": "Cohen",
      "sequence": "additional",
      "affiliation": []
    }
  ],
  "member": "78",
  "reference": [
    {
      "key": "10.1006/jmbi.1997.1395_BIB1",
      "doi-asserted-by": "crossref",
      "first-page": "1278",
      "DOI": "10.1126/science.272.5266.1278",
      "article-title": "The origin of programmed cell death",
      "volume": "272",
      "author": "Ameisen",
      "year": "1996",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB2",
      "doi-asserted-by": "crossref",
      "first-page": "3",
      "DOI": "10.1210/me.6.1.3",
      "article-title": "The origin of nuclear receptor proteins",
      "volume": "6",
      "author": "Amero",
      "year": "1992",
      "journal-title": "Mol. Endocrinol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB3",
      "doi-asserted-by": "crossref",
      "first-page": "747",
      "DOI": "10.1038/322747a0",
      "article-title": "Continuous and discontinuous protein antigenic determinants",
      "volume": "322",
      "author": "Barlow",
      "year": "1986",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB4",
      "doi-asserted-by": "crossref",
      "first-page": "219",
      "DOI": "10.1016/0065-2571(89)90073-3",
      "article-title": "Patterns of divergence in homologous proteins as indicators of tertiary and quaternary structure",
      "volume": "28",
      "author": "Benner",
      "year": "1989",
      "journal-title": "Advan. Enzyme Regul."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB5",
      "doi-asserted-by": "crossref",
      "first-page": "153",
      "DOI": "10.1093/protein/3.3.153",
      "article-title": "Construction of validated, non-redundant composite protein sequence databases",
      "volume": "3",
      "author": "Bleasby",
      "year": "1990",
      "journal-title": "Protein Eng."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB6",
      "doi-asserted-by": "crossref",
      "first-page": "197",
      "DOI": "10.1038/257197a0",
      "article-title": "Is the evolution of insulin Darwinian or due to selectively neutral mutation?",
      "volume": "257",
      "author": "Blundell",
      "year": "1975",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB7",
      "doi-asserted-by": "crossref",
      "first-page": "584",
      "DOI": "10.1128/MCB.16.2.584",
      "article-title": "A composite element binding the vitamin D receptor, retinoid X receptor alpha, and a member of the CTF/NF-1 family of transcription factors mediates the vitamin D responsiveness of the c-fos promoter",
      "volume": "16",
      "author": "Candeliere",
      "year": "1996",
      "journal-title": "Mol. Cell. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB8",
      "doi-asserted-by": "crossref",
      "first-page": "593",
      "DOI": "10.1038/339593a0",
      "article-title": "Protein encoded by v-erbA functions as a thyroid-hormone receptor antagonist",
      "volume": "339",
      "author": "Damm",
      "year": "1989",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB9",
      "doi-asserted-by": "crossref",
      "first-page": "387",
      "DOI": "10.1093/nar/12.1Part1.387",
      "article-title": "A comprehensive set of sequence analysis programs for the VAX",
      "volume": "12",
      "author": "Devereux",
      "year": "1984",
      "journal-title": "Nucl. Acids Res."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB10",
      "first-page": "61",
      "article-title": "The evolution and structure of aminergic G protein-coupled receptors",
      "volume": "2",
      "author": "Donnelly",
      "year": "1994",
      "journal-title": "Receptors Channels"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB11",
      "doi-asserted-by": "crossref",
      "first-page": "351",
      "DOI": "10.1007/BF02603120",
      "article-title": "Progressive sequence alignment as a prerequisite to correct phylogenetic trees",
      "volume": "25",
      "author": "Feng",
      "year": "1987",
      "journal-title": "J. Mol. Evol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB12",
      "doi-asserted-by": "crossref",
      "first-page": "496",
      "DOI": "10.1126/science.7542800",
      "article-title": "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd",
      "volume": "269",
      "author": "Fleischmann",
      "year": "1995",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB13",
      "doi-asserted-by": "crossref",
      "first-page": "362",
      "DOI": "10.1016/0955-0674(95)80091-3",
      "article-title": "Higher-order nucleoprotein complexes in transcription",
      "volume": "7",
      "author": "Grosschedl",
      "year": "1995",
      "journal-title": "Curr. Opin. Cell Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB14",
      "doi-asserted-by": "crossref",
      "first-page": "3113",
      "DOI": "10.1128/MCB.13.5.3113",
      "article-title": "The orphan receptor Rev-ErbA alpha activates transcription via a novel response element",
      "volume": "13",
      "author": "Harding",
      "year": "1993",
      "journal-title": "Mol. Cell Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB15",
      "doi-asserted-by": "crossref",
      "first-page": "1144",
      "DOI": "10.1126/science.7761829",
      "article-title": "Classical electrostatics in biology and chemistry",
      "volume": "268",
      "author": "Honig",
      "year": "1995",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB16",
      "doi-asserted-by": "crossref",
      "first-page": "5353",
      "DOI": "10.1016/S0021-9258(18)53327-5",
      "article-title": "Glucocorticoid receptor-cAMP response element-binding protein interaction and the response of the phosphoenolpyruvate carboxykinase gene to glucocorticoids",
      "volume": "268",
      "author": "Imai",
      "year": "1993",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB17",
      "doi-asserted-by": "crossref",
      "first-page": "16027",
      "DOI": "10.1016/S0021-9258(17)46181-3",
      "article-title": "The structure of protein-protein recognition sites",
      "volume": "265",
      "author": "Janim",
      "year": "1990",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB18",
      "doi-asserted-by": "crossref",
      "first-page": "133",
      "DOI": "10.1006/jmbi.1997.1233",
      "article-title": "Prediction of protein-protein interaction sites using patch analysis",
      "volume": "272",
      "author": "Jones",
      "year": "1997",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB19",
      "doi-asserted-by": "crossref",
      "first-page": "734",
      "DOI": "10.1038/329734a0",
      "article-title": "Oestrogen and glucocorticoid responsive elements are closely related but distinct",
      "volume": "329",
      "author": "Klock",
      "year": "1987",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB20",
      "doi-asserted-by": "crossref",
      "first-page": "2241",
      "DOI": "10.1002/j.1460-2075.1992.tb05283.x",
      "article-title": "Interference between pathway-specific transcription factors",
      "volume": "11",
      "author": "Konig",
      "year": "1992",
      "journal-title": "Embo J."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB21",
      "doi-asserted-by": "crossref",
      "first-page": "536",
      "DOI": "10.1126/science.274.5287.536",
      "article-title": "The new genomics",
      "volume": "274",
      "author": "Lander",
      "year": "1996",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB22",
      "doi-asserted-by": "crossref",
      "first-page": "1003",
      "DOI": "10.1002/j.1460-2075.1992.tb05139.x",
      "article-title": "Evolution of the nuclear receptor gene superfamily",
      "volume": "11",
      "author": "Laudet",
      "year": "1992",
      "journal-title": "Embo J."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB23",
      "doi-asserted-by": "crossref",
      "first-page": "1117",
      "DOI": "10.1126/science.8388124",
      "article-title": "Structure of the retinoid X receptor alpha DNA binding domain",
      "volume": "260",
      "author": "Lee",
      "year": "1993",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB24",
      "doi-asserted-by": "crossref",
      "first-page": "7507",
      "DOI": "10.1073/pnas.93.15.7507",
      "article-title": "Evolutionarily conserved Gabg binding surfaces support a model of the G protein-receptor complex",
      "volume": "93",
      "author": "Lichtarge",
      "year": "1996",
      "journal-title": "Proc Natl Acad Sci USA"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB25",
      "doi-asserted-by": "crossref",
      "first-page": "342",
      "DOI": "10.1006/jmbi.1996.0167",
      "article-title": "An evolutionary trace method defines binding surfaces common to protein families",
      "volume": "257",
      "author": "Lichtarge",
      "year": "1996",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB26",
      "doi-asserted-by": "crossref",
      "first-page": "12480",
      "DOI": "10.1073/pnas.92.26.12480",
      "article-title": "Steroid receptor heterodimerization demonstrated in vitro and in vivo",
      "volume": "92",
      "author": "Liu",
      "year": "1995",
      "journal-title": "Proc Natl Acad Sci USA"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB27",
      "doi-asserted-by": "crossref",
      "first-page": "497",
      "DOI": "10.1038/352497a0",
      "article-title": "Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA",
      "volume": "352",
      "author": "Luisi",
      "year": "1991",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB28",
      "doi-asserted-by": "crossref",
      "first-page": "732",
      "DOI": "10.1006/jmbi.1996.0548",
      "article-title": "Antibody-antigen interactions",
      "volume": "262",
      "author": "MacCallum",
      "year": "1996",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB29",
      "doi-asserted-by": "crossref",
      "first-page": "271",
      "DOI": "10.1038/338271a0",
      "article-title": "Three amino acids of the oestrogen receptor are essential to its ability to distinguish an oestrogen from a glucocorticoid-responsive element",
      "volume": "338",
      "author": "Mader",
      "year": "1989",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB30",
      "doi-asserted-by": "crossref",
      "first-page": "5029",
      "DOI": "10.1002/j.1460-2075.1993.tb06196.x",
      "article-title": "The patterns of binding of RAR, RXR and TR homo- and heterodimers to direct repeats are dictated by the binding specificites of the DNA binding domains",
      "volume": "12",
      "author": "Mader",
      "year": "1993",
      "journal-title": "Embo J."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB31",
      "doi-asserted-by": "crossref",
      "first-page": "3719",
      "DOI": "10.1002/j.1460-2075.1987.tb02706.x",
      "article-title": "The estrogen-responsive element as an inducible enhancer",
      "volume": "6",
      "author": "Martinez",
      "year": "1987",
      "journal-title": "Embo J."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB32",
      "doi-asserted-by": "crossref",
      "first-page": "4936",
      "DOI": "10.1093/nar/21.21.4936",
      "article-title": "Ribosomal protein L25 from Trypanosoma brucei",
      "volume": "21",
      "author": "Metzenberg",
      "year": "1993",
      "journal-title": "Nucl. Acids Res."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB33",
      "doi-asserted-by": "crossref",
      "first-page": "779",
      "DOI": "10.1038/312779a0",
      "article-title": "Characterization of a steroid hormone receptor gene and mRNA in wild-type and mutant cells",
      "volume": "312",
      "author": "Miesfeld",
      "year": "1984",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB34",
      "doi-asserted-by": "crossref",
      "first-page": "834",
      "DOI": "10.1038/328834a0",
      "article-title": "The accessible surface area and stability of oligomeric proteins",
      "volume": "328",
      "author": "Miller",
      "year": "1987",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB35",
      "doi-asserted-by": "crossref",
      "first-page": "422",
      "DOI": "10.1016/S0958-1669(96)80118-2",
      "article-title": "The current state of the art in protein structure prediction",
      "volume": "7",
      "author": "Moult",
      "year": "1996",
      "journal-title": "Curr. Opin. Biotechnol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB36",
      "doi-asserted-by": "crossref",
      "first-page": "251",
      "DOI": "10.1038/368251a0",
      "article-title": "Co-evolution of ligand-receptor pairs",
      "volume": "368",
      "author": "Moyle",
      "year": "1994",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB37",
      "doi-asserted-by": "crossref",
      "first-page": "536",
      "DOI": "10.1006/jmbi.1995.0159",
      "article-title": "SCOP",
      "volume": "247",
      "author": "Murzin",
      "year": "1995",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB38",
      "doi-asserted-by": "crossref",
      "first-page": "381",
      "DOI": "10.1126/science.275.5298.381",
      "article-title": "Receptor and beta gamma binding sites in the alpha subunit of the retinal G protein transducin",
      "volume": "275",
      "author": "Onrust",
      "year": "1997",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB39",
      "doi-asserted-by": "crossref",
      "first-page": "986",
      "DOI": "10.1126/science.1546296",
      "article-title": "Spatial control of the gap gene knirps in the Drosophila embryo by posterior morphogen system",
      "volume": "255",
      "author": "Pankratz",
      "year": "1992",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB40",
      "doi-asserted-by": "crossref",
      "first-page": "499",
      "DOI": "10.1016/0955-0674(93)90016-J",
      "article-title": "Steroid and related receptors",
      "volume": "5",
      "author": "Parker",
      "year": "1993",
      "journal-title": "Curr. Opin. Cell. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB41",
      "doi-asserted-by": "crossref",
      "first-page": "1161",
      "DOI": "10.1126/science.8382376",
      "article-title": "Mineralocorticoid and glucocorticoid receptor activities distinguished by nonreceptor factors at a composite response element",
      "volume": "259",
      "author": "Pearce",
      "year": "1993",
      "journal-title": "Science"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB42",
      "doi-asserted-by": "crossref",
      "first-page": "2444",
      "DOI": "10.1073/pnas.85.8.2444",
      "article-title": "Improved tools for biological sequence comparison",
      "volume": "85",
      "author": "Pearson",
      "year": "1988",
      "journal-title": "Proc. Natl Acad. Sci. USA"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB43",
      "doi-asserted-by": "crossref",
      "first-page": "203",
      "DOI": "10.1038/375203a0",
      "article-title": "Structural determinants of nuclear receptor assembly on DNA direct repeats",
      "volume": "375",
      "author": "Rastinejad",
      "year": "1995",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB44",
      "doi-asserted-by": "crossref",
      "first-page": "113",
      "DOI": "10.1146/annurev.bb.25.060196.000553",
      "article-title": "Bridging the protein sequence-structure gap by structure predictions",
      "volume": "25",
      "author": "Rost",
      "year": "1996",
      "journal-title": "Annu. Rev. Biophys. Biomol. Struct."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB45",
      "doi-asserted-by": "crossref",
      "first-page": "413",
      "DOI": "10.1210/me.9.4.413",
      "article-title": "In vivo footprinting of an androgen-dependent enhancer reveals an accessory element integral to hormonal response",
      "volume": "9",
      "author": "Scarlett",
      "year": "1995",
      "journal-title": "Mol. Endocrinol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB46",
      "doi-asserted-by": "crossref",
      "first-page": "478",
      "DOI": "10.1006/jmbi.1995.0235",
      "article-title": "Energetics of protein-protein interactions",
      "volume": "248",
      "author": "Schreiber",
      "year": "1995",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB47",
      "doi-asserted-by": "crossref",
      "first-page": "458",
      "DOI": "10.1038/348458a0",
      "article-title": "Solution structure of the DNA-binding domain of the oestrogen receptor",
      "volume": "348",
      "author": "Schwabe",
      "year": "1990",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB48",
      "doi-asserted-by": "crossref",
      "first-page": "567",
      "DOI": "10.1016/0092-8674(93)90390-C",
      "article-title": "The crystal structure of the estrogen receptor DNA-binding domain bound to DNA",
      "volume": "75",
      "author": "Schwabe",
      "year": "1993",
      "journal-title": "Cell"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB49",
      "doi-asserted-by": "crossref",
      "first-page": "885",
      "DOI": "10.1016/0092-8674(91)90435-2",
      "article-title": "v-erbA oncogene function in neoplasia correlates with its ability to repress retinoic acid receptor action",
      "volume": "66",
      "author": "Sharif",
      "year": "1991",
      "journal-title": "Cell"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB50",
      "doi-asserted-by": "crossref",
      "first-page": "347",
      "DOI": "10.1038/383347a0",
      "article-title": "Rhodopsin activation blocked by metal-ion-binding sites linking transmembrane helices C and F",
      "volume": "383",
      "author": "Sheikh",
      "year": "1996",
      "journal-title": "Nature"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB51",
      "series-title": "Numerical Taxonomy",
      "first-page": "230",
      "author": "Sneath",
      "year": "1973"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB52",
      "doi-asserted-by": "crossref",
      "first-page": "1271",
      "DOI": "10.1101/gad.10.10.1271",
      "article-title": "Intracellular receptors use a common mechanism to interpret signaling information at response elements",
      "volume": "10",
      "author": "Starr",
      "year": "1996",
      "journal-title": "Genes Dev."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB53",
      "doi-asserted-by": "crossref",
      "first-page": "329",
      "DOI": "10.1093/protein/8.4.329",
      "article-title": "DNA recognition and superstructure formation by helix-turn-helix proteins",
      "volume": "8",
      "author": "Suzuki",
      "year": "1995",
      "journal-title": "Protein Eng."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB54",
      "series-title": "The case for DNA mediated allosteric regulation of the glucocorticoid receptor. Ph.D thesis",
      "author": "Thomas",
      "year": "1993"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB55",
      "doi-asserted-by": "crossref",
      "first-page": "451",
      "DOI": "10.1146/annurev.bi.63.070194.002315",
      "article-title": "Molecular mechanisms of action of steroid/thyroid receptor superfamily members",
      "volume": "63",
      "author": "Tsai",
      "year": "1994",
      "journal-title": "Annu. Rev. Biochem."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB56",
      "doi-asserted-by": "crossref",
      "first-page": "1139",
      "DOI": "10.1016/0092-8674(89)90051-2",
      "article-title": "Determinants of target gene specificity for steroid/thyroid hormone receptors",
      "volume": "57",
      "author": "Umesono",
      "year": "1989",
      "journal-title": "Cell"
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB57",
      "doi-asserted-by": "crossref",
      "first-page": "163",
      "DOI": "10.1016/0955-0674(94)90132-5",
      "article-title": "Structural and functional basis for hormone binding and receptor oligomerization",
      "volume": "6",
      "author": "Wells",
      "year": "1994",
      "journal-title": "Curr. Opin. Cell. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB58",
      "doi-asserted-by": "crossref",
      "first-page": "5794",
      "DOI": "10.1128/MCB.13.9.5794",
      "article-title": "The orphan receptors NGFI-B and steroidogenic factor 1 establish monomer binding as a third paradigm of nuclear receptor-DNA interaction",
      "volume": "13",
      "author": "Wilson",
      "year": "1993",
      "journal-title": "Mol. Cell. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB59",
      "doi-asserted-by": "crossref",
      "first-page": "294",
      "DOI": "10.1006/jmbi.1996.0514",
      "article-title": "Structural classification of HTH DNA-binding domains and protein-DNA interaction modes",
      "volume": "262",
      "author": "Wintjens",
      "year": "1996",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB60",
      "doi-asserted-by": "crossref",
      "first-page": "5795",
      "DOI": "10.1074/jbc.271.10.5795",
      "article-title": "Estrogen-related receptor, hERR1 modulates estrogen receptor-mediated response of human lactoferrin gene promoter",
      "volume": "271",
      "author": "Yang",
      "year": "1996",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB61",
      "doi-asserted-by": "crossref",
      "first-page": "533",
      "DOI": "10.1146/annurev.bi.64.070195.002533",
      "article-title": "Common themes in assembly and function of eukaryotic transcription complexes",
      "volume": "64",
      "author": "Zawel",
      "year": "1995",
      "journal-title": "Annu. Rev. Biochem."
    },
    {
      "key": "10.1006/jmbi.1997.1395_BIB62",
      "doi-asserted-by": "crossref",
      "first-page": "357",
      "DOI": "10.1016/0022-5193(65)90083-4",
      "article-title": "Molecules as documents of evolutionary history",
      "volume": "8",
      "author": "Zuckerkandl",
      "year": "1965",
      "journal-title": "J. Theoret. Biol."
    }
  ],
  "container-title": "Journal of Molecular Biology",
  "original-title": [],
  "language": "en",
  "link": [
    {
      "URL": "https://api.elsevier.com/content/article/PII:S0022283697913954?httpAccept=text/xml",
      "content-type": "text/xml",
      "content-version": "vor",
      "intended-application": "text-mining"
    },
    {
      "URL": "https://api.elsevier.com/content/article/PII:S0022283697913954?httpAccept=text/plain",
      "content-type": "text/plain",
      "content-version": "vor",
      "intended-application": "text-mining"
    }
  ],
  "deposited": {
    "date-parts": [
      [
        2021,
        5,
        3
      ]
    ],
    "date-time": "2021-05-03T01:18:34Z",
    "timestamp": 1620004714000
  },
  "score": 1,
  "resource": {
    "primary": {
      "URL": "https://linkinghub.elsevier.com/retrieve/pii/S0022283697913954"
    }
  },
  "subtitle": [],
  "short-title": [],
  "issued": {
    "date-parts": [
      [
        1997,
        12
      ]
    ]
  },
  "references-count": 62,
  "journal-issue": {
    "issue": "3",
    "published-print": {
      "date-parts": [
        [
          1997,
          12
        ]
      ]
    }
  },
  "alternative-id": [
    "S0022283697913954"
  ],
  "URL": "http://dx.doi.org/10.1006/jmbi.1997.1395",
  "relation": {},
  "ISSN": [
    "0022-2836"
  ],
  "subject": [],
  "container-title-short": "Journal of Molecular Biology",
  "published": {
    "date-parts": [
      [
        1997,
        12
      ]
    ]
  }
}