DOI: 10.1002/jmri.22137. Pulmonary kinematics from tagged hyperpolarized helium‐3 MRI

Pulmonary kinematics from tagged hyperpolarized helium‐3 MRI

10.1002/jmri.22137

Crossref journal-article

Wiley

Journal of Magnetic Resonance Imaging (311)

Abstract

AbstractPurpose:To propose and test the feasibility of a novel method for quantifying 3D regional pulmonary kinematics from hyperpolarized helium‐3 tagged MRI in human subjects using a tailored image processing pipeline and a recently developed nonrigid registration framework.Materials and Methods:Following image acquisition, inspiratory and expiratory tagged 3He magnetic resonance (MR) images were preprocessed using various image filtering techniques to enhance the tag surfaces. Segmentation of the three orthogonal sets of tag planes in each lung produced distinct point‐set representations of the tag surfaces. Using these labeled point‐sets, deformation fields and corresponding strain maps were obtained via nonrigid point‐set registration. Kinematic analysis was performed on three volunteers.Results:Tag lines in inspiratory and expiratory images were coregistered producing a continuous 3D correspondence mapping. Average displacement and directional strains were calculated in three subjects in the inferior, mid, and superior portions of the right and left lungs. As expected, the predominant direction of displacements with expiration is from inferior to superior.Conclusion:Kinematic quantitation of pulmonary motion using tagged 3He MRI is feasible using the applied image preprocessing filtering techniques and nonrigid point‐set registration. Potential benefits from regional pulmonary kinematic quantitation include the facilitation of diagnosis and local assessment of disease progression. J. Magn. Reson. Imaging 2010;31:1236–1241. © 2010 Wiley‐Liss, Inc.

Bibliography

Tustison, N. J., Awate, S. P., Cai, J., Altes, T. A., Miller, G. W., de Lange, E. E., Mugler, J. P., & Gee, J. C. (2010). Pulmonary kinematics from tagged hyperpolarized heliumâ3 MRI. Journal of Magnetic Resonance Imaging, 31(5), 1236â1241. Portico.

Authors 8

Nicholas J. Tustison (first)
Suyash P. Awate (additional)
Jing Cai (additional)
Talissa A. Altes (additional)
G. Wilson Miller (additional)
Eduard E. de Lange (additional)
John P. Mugler (additional)
James C. Gee (additional)

References 20 Referenced 22

10.1097/MCP.0b013e3282f197df
10.1378/chest.121.3.715
10.1002/jmri.10226
10.1002/mrm.21288
10.1016/j.ijrobp.2007.02.011
10.1016/j.ijrobp.2009.03.051
10.1148/radiology.171.3.2717762
10.1148/radiology.169.1.3420283
10.1002/1522-2594(200101)45:1<24::AID-MRM1004>3.0.CO;2-6
10.1002/mrm.20682
10.1109/42.668698
{'key': 'e_1_2_5_13_2', 'article-title': "N4ITK: Nick's N3 ITK implementation for MRI bias field correction", 'author': 'Tustison NJ', 'year': '2009', 'journal-title': 'Insight J'} / Insight J / N4ITK: Nick's N3 ITK implementation for MRI bias field correction by Tustison NJ (2009)
{'key': 'e_1_2_5_14_2', 'volume-title': 'Image processing: analysis and machine vision', 'author': 'Sonka M', 'year': '1998'} / Image processing: analysis and machine vision by Sonka M (1998)
10.1109/TSMC.1979.4310076
10.1016/S1361-8415(97)85005-0
TustisonNJ GeeJC.Generalizedn‐DCkB‐spline scattered data approximation with confidence values. In: Proceedings of the 3rd International Workshop on Medical Imaging and Augmented Reality (MIAR);2006. p76–83. (10.1007/11812715_10)
QianZ MetaxasDN AxelL.Extraction and tracking of MRI tagging sheets using a 3D Gabor filter bank. In: Proceedings of the 28th Annual International Conference of the Engineering in Medicine and Biology Society (EMBS);2006. p711–714. (10.1109/IEMBS.2006.259542)
TustisonNJ AwateSP SongG CookTS GeeJC.A new information‐theoretic measure to control the robustness‐sensitivity trade‐off for DMFFD point‐set registration. In: Proceedings of the 21st Biennial International Conference on Information Processing in Medical Imaging (IPMI) Williamsburg VA;2009. p215–226. (10.1007/978-3-642-02498-6_18)
10.54294/qw6pt8 / Insight J / A novel information‐theoretic point‐set measure based on the Jensen‐Havrda‐Charvat‐Tsallis divergence by Tustison NJ (2008)
10.1109/TIP.2008.2010072

Dates

Type	When
Created	15 years, 3 months ago (April 23, 2010, 6:36 p.m.)
Deposited	1 year, 10 months ago (Oct. 8, 2023, 3:35 p.m.)
Indexed	4 months, 1 week ago (April 11, 2025, 4:05 p.m.)
Issued	15 years, 4 months ago (April 23, 2010)
Published	15 years, 4 months ago (April 23, 2010)
Published Online	15 years, 4 months ago (April 23, 2010)
Published Print	15 years, 3 months ago (May 1, 2010)

Funders 0

None

BibTeX

@article{Tustison_2010, title={Pulmonary kinematics from tagged hyperpolarized helium‐3 MRI}, volume={31}, ISSN={1522-2586}, url={http://dx.doi.org/10.1002/jmri.22137}, DOI={10.1002/jmri.22137}, number={5}, journal={Journal of Magnetic Resonance Imaging}, publisher={Wiley}, author={Tustison, Nicholas J. and Awate, Suyash P. and Cai, Jing and Altes, Talissa A. and Miller, G. Wilson and de Lange, Eduard E. and Mugler, John P. and Gee, James C.}, year={2010}, month=apr, pages={1236–1241} }

JSON

{
  "indexed": {
    "date-parts": [
      [
        2025,
        4,
        11
      ]
    ],
    "date-time": "2025-04-11T20:05:21Z",
    "timestamp": 1744401921522
  },
  "reference-count": 20,
  "publisher": "Wiley",
  "issue": "5",
  "license": [
    {
      "start": {
        "date-parts": [
          [
            2010,
            4,
            23
          ]
        ],
        "date-time": "2010-04-23T00:00:00Z",
        "timestamp": 1271980800000
      },
      "content-version": "vor",
      "delay-in-days": 0,
      "URL": "http://onlinelibrary.wiley.com/termsAndConditions#vor"
    }
  ],
  "content-domain": {
    "domain": [],
    "crossmark-restriction": false
  },
  "published-print": {
    "date-parts": [
      [
        2010,
        5
      ]
    ]
  },
  "abstract": "<jats:title>Abstract</jats:title><jats:sec><jats:title>Purpose:</jats:title><jats:p>To propose and test the feasibility of a novel method for quantifying 3D regional pulmonary kinematics from hyperpolarized helium\u20103 tagged MRI in human subjects using a tailored image processing pipeline and a recently developed nonrigid registration framework.</jats:p></jats:sec><jats:sec><jats:title>Materials and Methods:</jats:title><jats:p>Following image acquisition, inspiratory and expiratory tagged <jats:sup>3</jats:sup>He magnetic resonance (MR) images were preprocessed using various image filtering techniques to enhance the tag surfaces. Segmentation of the three orthogonal sets of tag planes in each lung produced distinct point\u2010set representations of the tag surfaces. Using these labeled point\u2010sets, deformation fields and corresponding strain maps were obtained via nonrigid point\u2010set registration. Kinematic analysis was performed on three volunteers.</jats:p></jats:sec><jats:sec><jats:title>Results:</jats:title><jats:p>Tag lines in inspiratory and expiratory images were coregistered producing a continuous 3D correspondence mapping. Average displacement and directional strains were calculated in three subjects in the inferior, mid, and superior portions of the right and left lungs. As expected, the predominant direction of displacements with expiration is from inferior to superior.</jats:p></jats:sec><jats:sec><jats:title>Conclusion:</jats:title><jats:p>Kinematic quantitation of pulmonary motion using tagged <jats:sup>3</jats:sup>He MRI is feasible using the applied image preprocessing filtering techniques and nonrigid point\u2010set registration. Potential benefits from regional pulmonary kinematic quantitation include the facilitation of diagnosis and local assessment of disease progression. J. Magn. Reson. Imaging 2010;31:1236\u20131241. \u00a9 2010 Wiley\u2010Liss, Inc.</jats:p></jats:sec>",
  "DOI": "10.1002/jmri.22137",
  "type": "journal-article",
  "created": {
    "date-parts": [
      [
        2010,
        4,
        23
      ]
    ],
    "date-time": "2010-04-23T22:36:19Z",
    "timestamp": 1272062179000
  },
  "page": "1236-1241",
  "source": "Crossref",
  "is-referenced-by-count": 22,
  "title": "Pulmonary kinematics from tagged hyperpolarized helium\u20103 MRI",
  "prefix": "10.1002",
  "volume": "31",
  "author": [
    {
      "given": "Nicholas J.",
      "family": "Tustison",
      "sequence": "first",
      "affiliation": []
    },
    {
      "given": "Suyash P.",
      "family": "Awate",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Jing",
      "family": "Cai",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Talissa A.",
      "family": "Altes",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "G. Wilson",
      "family": "Miller",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "Eduard E.",
      "family": "de Lange",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "suffix": "III",
      "given": "John P.",
      "family": "Mugler",
      "sequence": "additional",
      "affiliation": []
    },
    {
      "given": "James C.",
      "family": "Gee",
      "sequence": "additional",
      "affiliation": []
    }
  ],
  "member": "311",
  "published-online": {
    "date-parts": [
      [
        2010,
        4,
        23
      ]
    ]
  },
  "reference": [
    {
      "key": "e_1_2_5_2_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1097/MCP.0b013e3282f197df"
    },
    {
      "key": "e_1_2_5_3_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1378/chest.121.3.715"
    },
    {
      "key": "e_1_2_5_4_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1002/jmri.10226"
    },
    {
      "key": "e_1_2_5_5_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1002/mrm.21288"
    },
    {
      "key": "e_1_2_5_6_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1016/j.ijrobp.2007.02.011"
    },
    {
      "key": "e_1_2_5_7_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1016/j.ijrobp.2009.03.051"
    },
    {
      "key": "e_1_2_5_8_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1148/radiology.171.3.2717762"
    },
    {
      "key": "e_1_2_5_9_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1148/radiology.169.1.3420283"
    },
    {
      "key": "e_1_2_5_10_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1002/1522-2594(200101)45:1<24::AID-MRM1004>3.0.CO;2-6"
    },
    {
      "key": "e_1_2_5_11_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1002/mrm.20682"
    },
    {
      "key": "e_1_2_5_12_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1109/42.668698"
    },
    {
      "key": "e_1_2_5_13_2",
      "article-title": "N4ITK: Nick's N3 ITK implementation for MRI bias field correction",
      "author": "Tustison NJ",
      "year": "2009",
      "journal-title": "Insight J"
    },
    {
      "key": "e_1_2_5_14_2",
      "volume-title": "Image processing: analysis and machine vision",
      "author": "Sonka M",
      "year": "1998"
    },
    {
      "key": "e_1_2_5_15_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1109/TSMC.1979.4310076"
    },
    {
      "key": "e_1_2_5_16_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1016/S1361-8415(97)85005-0"
    },
    {
      "key": "e_1_2_5_17_2",
      "doi-asserted-by": "crossref",
      "unstructured": "TustisonNJ GeeJC.Generalizedn\u2010DCkB\u2010spline scattered data approximation with confidence values. In: Proceedings of the 3rd International Workshop on Medical Imaging and Augmented Reality (MIAR);2006. p76\u201383.",
      "DOI": "10.1007/11812715_10"
    },
    {
      "key": "e_1_2_5_18_2",
      "doi-asserted-by": "crossref",
      "unstructured": "QianZ MetaxasDN AxelL.Extraction and tracking of MRI tagging sheets using a 3D Gabor filter bank. In: Proceedings of the 28th Annual International Conference of the Engineering in Medicine and Biology Society (EMBS);2006. p711\u2013714.",
      "DOI": "10.1109/IEMBS.2006.259542"
    },
    {
      "key": "e_1_2_5_19_2",
      "doi-asserted-by": "crossref",
      "unstructured": "TustisonNJ AwateSP SongG CookTS GeeJC.A new information\u2010theoretic measure to control the robustness\u2010sensitivity trade\u2010off for DMFFD point\u2010set registration. In: Proceedings of the 21st Biennial International Conference on Information Processing in Medical Imaging (IPMI) Williamsburg VA;2009. p215\u2013226.",
      "DOI": "10.1007/978-3-642-02498-6_18"
    },
    {
      "key": "e_1_2_5_20_2",
      "doi-asserted-by": "crossref",
      "DOI": "10.54294/qw6pt8",
      "article-title": "A novel information\u2010theoretic point\u2010set measure based on the Jensen\u2010Havrda\u2010Charvat\u2010Tsallis divergence",
      "author": "Tustison NJ",
      "year": "2008",
      "journal-title": "Insight J"
    },
    {
      "key": "e_1_2_5_21_2",
      "doi-asserted-by": "publisher",
      "DOI": "10.1109/TIP.2008.2010072"
    }
  ],
  "container-title": "Journal of Magnetic Resonance Imaging",
  "original-title": [],
  "language": "en",
  "link": [
    {
      "URL": "https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2Fjmri.22137",
      "content-type": "unspecified",
      "content-version": "vor",
      "intended-application": "text-mining"
    },
    {
      "URL": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/jmri.22137",
      "content-type": "unspecified",
      "content-version": "vor",
      "intended-application": "similarity-checking"
    }
  ],
  "deposited": {
    "date-parts": [
      [
        2023,
        10,
        8
      ]
    ],
    "date-time": "2023-10-08T19:35:35Z",
    "timestamp": 1696793735000
  },
  "score": 1,
  "resource": {
    "primary": {
      "URL": "https://onlinelibrary.wiley.com/doi/10.1002/jmri.22137"
    }
  },
  "subtitle": [],
  "short-title": [],
  "issued": {
    "date-parts": [
      [
        2010,
        4,
        23
      ]
    ]
  },
  "references-count": 20,
  "journal-issue": {
    "issue": "5",
    "published-print": {
      "date-parts": [
        [
          2010,
          5
        ]
      ]
    }
  },
  "alternative-id": [
    "10.1002/jmri.22137"
  ],
  "URL": "http://dx.doi.org/10.1002/jmri.22137",
  "relation": {},
  "ISSN": [
    "1053-1807",
    "1522-2586"
  ],
  "subject": [],
  "container-title-short": "Magnetic Resonance Imaging",
  "published": {
    "date-parts": [
      [
        2010,
        4,
        23
      ]
    ]
  }
}